Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF752 and GFF753 are separated by 130 nucleotidesGFF753 and GFF754 are separated by 156 nucleotidesGFF754 and GFF755 are separated by 147 nucleotidesGFF755 and GFF756 overlap by 4 nucleotides GFF752 - hypothetical protein, at 15,417 to 15,758 GFF752 GFF753 - Methyl-accepting chemotaxis sensor/transducer protein, at 15,889 to 17,532 GFF753 GFF754 - FIG00975093: hypothetical protein, at 17,689 to 18,522 GFF754 GFF755 - Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB, at 18,670 to 20,568 GFF755 GFF756 - no description, at 20,565 to 20,711 GFF756
Group Condition GFF752 GFF753 GFF754 GFF755 GFF756
complex community Community=arabino-guar; Passage=4 -0.8 -0.8 +0.1 -0.5 -0.1
complex community Community=Locust bean gum; Passage=4 -1.3 -0.2 -0.7 +0.2 +0.0
complex community Community=guar; Passage=4 -0.3 +0.0 -0.9 +0.3 -0.1
complex community Community=guar; Passage=4 +0.4 -0.5 -0.4 -0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.4 -0.1 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 -0.0 -0.3 -0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.4 +0.1 -0.3 -0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.0 +0.0 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 -0.4 -0.1 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.2 +0.1 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 -0.2 -0.3 -0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus -0.3 +0.1 -0.1 -0.1 -0.1
complex community Community=arabino-guar; Passage=4 -0.3 -0.0 -0.0 +0.2 -0.3
complex community Community=arabino-guar; Passage=4 -0.3 -0.3 +0.0 +0.3 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.0 -0.3 -0.1 +0.1 -0.1
no phage control no phage control -0.2 -0.3 +0.3 -0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.1 +0.0 -0.3 -0.1
complex community Community=Locust bean gum; Passage=4 -0.0 -0.1 -0.4 +0.2 +0.1
complex community Community=Kojac gum; Passage=4 +0.6 -0.7 +0.1 +0.2 -0.3
phage phage_bap4 -0.5 -0.1 +0.2 +0.3 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.4 -0.1 -0.1 -0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus +0.3 -0.2 -0.1 -0.0 -0.0
complex community Community=guar; Passage=4 +0.2 -0.1 -0.5 +0.3 +0.0
complex community Community=Locust bean gum; Passage=4 +0.5 -0.2 -1.0 +0.4 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 +0.3 +0.0 +0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 +0.2 +0.0 +0.1 -0.3
complex community Community=arabino-guar; Passage=4 +0.8 -0.5 -0.1 -0.1 +0.2
phage phage_bap4 -0.1 -0.1 +0.1 +0.4 +0.1
phage phage_bap4 +0.0 -0.1 +0.3 +0.3 +0.0
complex community Community=Locust bean gum; Passage=4 +0.3 +0.2 -0.2 +0.3 +0.2
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