Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF749 and GFF750 are separated by 168 nucleotidesGFF750 and GFF751 are separated by 6 nucleotidesGFF751 and GFF752 are separated by 36 nucleotidesGFF752 and GFF753 are separated by 130 nucleotides GFF749 - 4-oxalomesaconate hydratase (EC 4.2.1.83), at 12,450 to 13,478 GFF749 GFF750 - Transcriptional regulator LigR, LysR family, at 13,647 to 14,924 GFF750 GFF751 - probable acetyltransferase protein, at 14,931 to 15,380 GFF751 GFF752 - hypothetical protein, at 15,417 to 15,758 GFF752 GFF753 - Methyl-accepting chemotaxis sensor/transducer protein, at 15,889 to 17,532 GFF753
Group Condition GFF749 GFF750 GFF751 GFF752 GFF753
complex community Community=arabino-guar; Passage=4 +0.2 -0.1 +0.0 -0.8 -0.8
complex community Community=arabino-guar; Passage=4 -0.1 -0.4 -0.1 -0.3 -0.3
complex community Community=Locust bean gum; Passage=4 -0.1 -0.9 -0.7 +0.3 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.6 -0.5 +0.2 -0.1 +0.0
vitamin M9 with Supernatant from Cyptococcus -0.4 -0.3 -0.2 -0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.7 +0.1 -0.3 -0.0
complex community Community=guar; Passage=4 +0.3 -0.2 -0.8 -0.3 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 -0.4 +0.2 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.6 +0.2 +0.0 -0.4
vitamin M9 with Supernatant from Cyptococcus -0.5 -0.4 +0.2 -0.3 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 -0.4 +0.3 -0.2 -0.2
complex community Community=arabino-guar; Passage=4 +0.5 -0.6 -0.3 -0.3 -0.0
complex community Community=Kojac gum; Passage=4 -0.5 -0.3 +0.1 +0.6 -0.7
complex community Community=Locust bean gum; Passage=4 +0.8 -0.1 -0.0 -1.3 -0.2
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.7 +0.0 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.5 -0.1 +0.1 +0.1
phage phage_bap4 -0.2 +0.2 +0.2 -0.5 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.1 -0.5 +0.3 -0.2
phage phage_bap4 -0.4 +0.4 -0.3 -0.0 -0.0
complex community Community=guar; Passage=4 -0.0 -0.5 +0.3 +0.4 -0.5
phage phage_bap4 -0.4 +0.4 -0.1 -0.1 -0.1
complex community Community=Locust bean gum; Passage=4 -0.4 -0.5 +0.5 +0.5 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.5 -0.1 +0.1 -0.2 -0.4
phage phage_bap4 -0.4 +0.3 -0.2 +0.3 -0.0
complex community Community=guar; Passage=4 -0.7 +0.6 +0.1 +0.2 -0.1
phage phage_bap4 -0.5 +0.4 +0.3 -0.1 +0.0
complex community Community=guar; Passage=4 -0.6 +0.6 +0.1 +0.3 -0.1
phage phage_bap4 -0.2 +0.7 +0.0 +0.0 -0.2
complex community Community=Locust bean gum; Passage=4 +0.4 -0.0 +0.4 -0.0 -0.1
complex community Community=arabino-guar; Passage=4 -0.1 +1.0 -0.1 +0.8 -0.5
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