Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF744 and GFF745 are separated by 25 nucleotidesGFF745 and GFF746 are separated by 11 nucleotidesGFF746 and GFF747 are separated by 35 nucleotidesGFF747 and GFF748 are separated by 15 nucleotides GFF744 - 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases, at 7,481 to 8,374 GFF744 GFF745 - BUG/TctC family periplasmic protein, at 8,400 to 9,401 GFF745 GFF746 - BUG/TctC family periplasmic protein, at 9,413 to 10,393 GFF746 GFF747 - Protocatechuate 4,5-dioxygenase beta chain (EC 1.13.11.8), at 10,429 to 11,733 GFF747 GFF748 - 4-carboxy-4-hydroxy-2-oxoadipate aldolase (EC 4.1.3.17), at 11,749 to 12,447 GFF748
Group Condition GFF744 GFF745 GFF746 GFF747 GFF748
complex community Community=Locust bean gum; Passage=4 -0.6 -0.5 -0.7 +0.0 N.D.
complex community Community=arabino-guar; Passage=4 -0.7 -0.5 +0.0 -0.1 N.D.
complex community Community=guar; Passage=4 +0.0 -0.8 -0.3 -0.3 N.D.
complex community Community=arabino-guar; Passage=4 +0.0 -1.5 -0.1 +0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 -0.5 -0.4 -0.2 N.D.
vitamin M9 with Supernatant from Cyptococcus -0.3 -0.1 -0.6 -0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.4 +0.1 -0.2 -0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.2 -0.2 -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 -0.1 -0.3 -0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.1 -0.1 -0.2 N.D.
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.2 -0.1 -0.2 N.D.
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.1 -0.3 +0.0 N.D.
complex community Community=arabino-guar; Passage=4 +0.1 -0.7 -0.2 +0.4 N.D.
complex community Community=Locust bean gum; Passage=4 -0.2 -0.1 -0.2 +0.1 N.D.
complex community Community=guar; Passage=4 +0.2 -0.3 -0.3 -0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -0.3 -0.3 +0.1 N.D.
complex community Community=Kojac gum; Passage=4 +0.4 -0.1 -0.5 -0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 +0.2 -0.4 -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 +0.2 -0.2 +0.0 N.D.
complex community Community=guar; Passage=4 +0.3 -0.0 -0.5 +0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.0 +0.3 -0.2 -0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 +0.3 +0.1 -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 +0.3 -0.1 -0.1 N.D.
complex community Community=Locust bean gum; Passage=4 +0.2 +0.0 +0.2 -0.2 N.D.
complex community Community=arabino-guar; Passage=4 -0.3 +0.5 +0.0 -0.0 N.D.
no phage control no phage control +0.1 -0.1 +0.3 +0.1 N.D.
complex community Community=guar; Passage=4 -0.1 +0.3 -0.1 +0.2 N.D.
phage phage_bap4 +0.2 +0.1 +0.2 -0.1 N.D.
phage phage_bap4 +0.3 +0.1 +0.1 +0.1 N.D.
phage phage_bap4 +0.3 +0.3 +0.2 +0.2 N.D.
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