Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF737 and GFF738 are separated by 52 nucleotidesGFF738 and GFF739 are separated by 357 nucleotidesGFF739 and GFF740 are separated by 338 nucleotidesGFF740 and GFF741 are separated by 38 nucleotides GFF737 - FIG00720498: hypothetical protein, at 391 to 813 GFF737 GFF738 - T6SS PAAR-repeat protein, at 866 to 1,009 GFF738 GFF739 - BUG/TctC family periplasmic protein, at 1,367 to 2,374 GFF739 GFF740 - Uncharacterized protein YdcJ, at 2,713 to 4,092 GFF740 GFF741 - Transcriptional regulator, LysR family, at 4,131 to 5,024 GFF741
Group Condition GFF737 GFF738 GFF739 GFF740 GFF741
complex community Community=arabino-guar; Passage=4 -0.4 -0.7 -0.2 -0.2 -0.8
complex community Community=arabino-guar; Passage=4 -0.4 -0.7 +0.1 +0.2 -1.0
complex community Community=Kojac gum; Passage=4 -0.0 -0.5 -0.2 -0.0 -0.9
complex community Community=Locust bean gum; Passage=4 -0.2 -0.6 -0.1 -0.3 -0.2
complex community Community=guar; Passage=4 -0.1 +0.1 +0.0 -0.3 -1.0
complex community Community=guar; Passage=4 -0.2 -0.0 -0.2 -0.2 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.0 -0.1 -0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.2 -0.1 -0.0 -0.3
complex community Community=guar; Passage=4 -0.3 +0.3 -0.1 +0.1 -0.6
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.3 -0.0 -0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.3 +0.1 -0.0 -0.2
complex community Community=arabino-guar; Passage=4 -0.2 -0.4 +0.0 +0.3 -0.2
complex community Community=arabino-guar; Passage=4 -0.2 +0.5 -0.1 -0.4 -0.2
complex community Community=guar; Passage=4 -0.1 +0.2 -0.1 +0.2 -0.5
no phage control no phage control +0.2 -0.3 -0.1 -0.1 +0.0
complex community Community=Locust bean gum; Passage=4 -0.1 +0.1 -0.2 -0.2 +0.2
phage phage_bap4 +0.2 -0.5 +0.0 +0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.1 -0.2 +0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.3 +0.2 +0.0 +0.2 -0.0
no phage control no phage control +0.1 -0.2 -0.0 -0.0 +0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 +0.4 -0.0 -0.1 +0.1
phage phage_bap4 +0.0 -0.2 +0.1 +0.1 +0.2
complex community Community=Locust bean gum; Passage=4 -0.2 +0.0 +0.1 +0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.1 -0.0 -0.1 +0.4
vitamin M9 with Supernatant from Cyptococcus -0.0 +0.2 +0.1 +0.2 -0.1
phage phage_bap4 -0.1 -0.1 +0.0 +0.3 +0.3
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.3 -0.1 +0.2 +0.0
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.5 -0.1 -0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.5 +0.1 +0.0 +0.1
phage phage_bap4 +0.0 +0.3 +0.2 +0.2 +0.5
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