Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF7375 and GFF7376 are separated by 16 nucleotidesGFF7376 and GFF7377 are separated by 152 nucleotidesGFF7377 and GFF7378 overlap by 4 nucleotidesGFF7378 and GFF7379 overlap by 4 nucleotides GFF7375 - Arginine:pyruvate transaminase, at 4,748 to 5,956 GFF7375 GFF7376 - Transcriptional regulator, LysR family, at 5,973 to 6,884 GFF7376 GFF7377 - Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27), at 7,037 to 8,560 GFF7377 GFF7378 - protein of unknown function DUF1311, at 8,557 to 8,955 GFF7378 GFF7379 - Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12), at 8,952 to 10,106 GFF7379
Group Condition GFF7375 GFF7376 GFF7377 GFF7378 GFF7379
complex community Community=Kojac gum; Passage=4 +0.7 -2.2 -3.8 +0.2 -3.4
complex community Community=Locust bean gum; Passage=4 +0.3 -2.3 -3.2 -0.0 -2.7
complex community Community=Locust bean gum; Passage=4 +1.4 -1.6 -2.6 -1.2 -2.3
complex community Community=guar; Passage=4 +0.2 -1.7 -3.8 +1.2 -2.3
complex community Community=guar; Passage=4 +1.1 -0.6 -2.7 -0.9 -2.7
complex community Community=Locust bean gum; Passage=4 +1.6 -1.4 -3.1 -0.4 -1.4
complex community Community=guar; Passage=4 +0.7 -0.8 -2.9 +2.2 -3.3
complex community Community=arabino-guar; Passage=4 +0.7 -0.1 -2.8 +0.7 -2.3
complex community Community=guar; Passage=4 +0.8 -0.7 -2.5 +1.0 -2.1
complex community Community=arabino-guar; Passage=4 +0.5 -1.2 -2.1 +2.0 -2.8
complex community Community=Locust bean gum; Passage=4 +1.0 -1.7 -1.3 +1.3 -2.6
complex community Community=arabino-guar; Passage=4 +1.1 -0.1 -2.4 +0.3 -1.8
complex community Community=arabino-guar; Passage=4 +0.9 -0.6 -2.2 +1.4 -1.8
phage phage_bap4 -0.1 -0.1 +0.2 -1.4 -0.0
phage phage_bap4 -0.1 -0.2 +0.1 -1.0 +0.0
phage phage_bap4 +0.0 -0.2 +0.1 -0.7 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 +0.2 +0.0 -0.7 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.0 -0.4 +0.3 -0.7 +0.1
phage phage_bap4 +0.0 +0.0 +0.4 -0.8 -0.0
no phage control no phage control +0.1 +0.1 +0.1 -0.8 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.0 -0.3 +0.4 +0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.0 +0.2 +0.3 -0.4
complex community Community=Locust bean gum; Passage=1 +0.1 +0.1 -0.0 +0.4 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 +0.2 +0.0 +0.6 -0.2
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.4 +0.2 +0.5 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 +0.0 -0.0 +0.7 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 +0.2 -0.1 +0.6 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 +0.1 +0.2 +0.6 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.2 +0.1 +1.0 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 +0.1 +0.1 +0.9 +0.1
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