Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF7373 and GFF7374 are separated by 16 nucleotidesGFF7374 and GFF7375 are separated by 4 nucleotidesGFF7375 and GFF7376 are separated by 16 nucleotidesGFF7376 and GFF7377 are separated by 152 nucleotides GFF7373 - CaiB/BaiF family protein, at 2,259 to 3,650 GFF7373 GFF7374 - FIG00984748: hypothetical protein, at 3,667 to 4,743 GFF7374 GFF7375 - Arginine:pyruvate transaminase, at 4,748 to 5,956 GFF7375 GFF7376 - Transcriptional regulator, LysR family, at 5,973 to 6,884 GFF7376 GFF7377 - Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27), at 7,037 to 8,560 GFF7377
Group Condition GFF7373 GFF7374 GFF7375 GFF7376 GFF7377
complex community Community=guar; Passage=4 +0.3 +0.2 +0.2 -1.7 -3.8
complex community Community=Locust bean gum; Passage=4 +0.2 +0.3 +0.3 -2.3 -3.2
complex community Community=Kojac gum; Passage=4 +0.3 +0.8 +0.7 -2.2 -3.8
complex community Community=arabino-guar; Passage=4 +0.6 +0.1 +0.7 -0.1 -2.8
complex community Community=arabino-guar; Passage=4 +0.8 +0.5 +0.5 -1.2 -2.1
complex community Community=guar; Passage=4 +1.0 +0.8 +0.7 -0.8 -2.9
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.1 +0.1 -0.4 +0.2
complex community Community=guar; Passage=4 +1.1 +1.1 +0.8 -0.7 -2.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.3 +0.2 +0.0 +0.0 -0.0
phage phage_bap4 -0.4 +0.1 -0.0 +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.3 +0.2 +0.0 -0.4 +0.3
complex community Community=arabino-guar; Passage=4 +1.0 +0.8 +0.9 -0.6 -2.2
complex community Community=Locust bean gum; Passage=4 +1.3 +1.4 +1.4 -1.6 -2.6
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 +0.0 -0.1 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.0 -0.1 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -0.1 +0.1 +0.2 -0.3
phage phage_bap4 +0.1 +0.1 -0.1 -0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.0 +0.1 -0.0 -0.3 +0.4
phage phage_bap4 -0.1 -0.1 +0.0 +0.0 +0.4
complex community Community=Locust bean gum; Passage=4 +1.4 +1.8 +1.6 -1.4 -3.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 -0.0 -0.1 +0.2 -0.1
phage phage_bap4 +0.1 +0.1 +0.0 -0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.0 +0.1 +0.2 +0.1
complex community Community=Locust bean gum; Passage=4 +1.1 +1.3 +1.0 -1.7 -1.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 +0.2 -0.1 +0.1 +0.3
complex community Community=guar; Passage=4 +1.4 +1.3 +1.1 -0.6 -2.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.3 +0.1 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 +0.3 +0.2 +0.2 -0.1
complex community Community=arabino-guar; Passage=4 +1.3 +0.8 +1.1 -0.1 -2.4
no phage control no phage control +0.3 +0.1 +0.1 +0.1 +0.1
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