Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF7370 and GFF7371 are separated by 94 nucleotidesGFF7371 and GFF7372 are separated by 1 nucleotidesGFF7372 and GFF7373 are separated by 72 nucleotidesGFF7373 and GFF7374 are separated by 16 nucleotides GFF7370 - PAS domain with LuxR-type DNA-binding domain, at 73 to 639 GFF7370 GFF7371 - Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5), at 734 to 1,546 GFF7371 GFF7372 - Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5), at 1,548 to 2,186 GFF7372 GFF7373 - CaiB/BaiF family protein, at 2,259 to 3,650 GFF7373 GFF7374 - FIG00984748: hypothetical protein, at 3,667 to 4,743 GFF7374
Group Condition GFF7370 GFF7371 GFF7372 GFF7373 GFF7374
no phage control no phage control -0.9 +0.0 -0.2 +0.1 +0.1
complex community Community=Kojac gum; Passage=1 -1.4 +0.3 +0.3 -0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.7 -0.2 -0.2 +0.0 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.7 -0.1 -0.0 +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.8 +0.1 +0.2 -0.3 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.6 +0.1 +0.0 -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.4 -0.2 -0.6 +0.1 +0.0
phage phage_bap4 +0.7 -0.2 -0.2 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.6 -0.0 +0.0 -0.2 -0.1
phage phage_bap4 +0.7 -0.2 +0.1 -0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.5 +0.2 -0.0 -0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.2 +0.5 +0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.5 +0.2 -0.1 +0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.7 +0.1 -0.1 -0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.7 +0.3 +0.1 -0.1 -0.0
phage phage_bap4 +1.2 -0.0 -0.0 +0.0 +0.0
phage phage_bap4 +1.0 -0.2 +0.1 +0.1 +0.1
phage phage_bap4 +1.3 -0.2 +0.1 -0.1 -0.0
complex community Community=Kojac gum; Passage=4 -0.2 +0.6 +0.5 +0.3 +0.8
complex community Community=guar; Passage=4 -0.1 +0.3 +0.1 +1.0 +0.8
complex community Community=arabino-guar; Passage=4 -1.2 +1.0 +0.1 +1.3 +0.8
complex community Community=Locust bean gum; Passage=4 +0.0 +0.6 +0.8 +0.2 +0.3
complex community Community=arabino-guar; Passage=4 +1.1 +0.6 -0.1 +0.6 +0.1
complex community Community=arabino-guar; Passage=4 -0.5 +0.6 +0.9 +0.8 +0.5
complex community Community=arabino-guar; Passage=4 -0.9 +1.2 +0.6 +1.0 +0.8
complex community Community=guar; Passage=4 -1.1 +0.7 +0.8 +1.1 +1.1
complex community Community=Locust bean gum; Passage=4 +0.4 +1.5 -0.4 +1.1 +1.3
complex community Community=guar; Passage=4 +1.5 +0.9 +0.6 +1.4 +1.3
complex community Community=Locust bean gum; Passage=4 +0.4 +1.5 +1.3 +1.4 +1.8
complex community Community=Locust bean gum; Passage=4 +1.2 +1.7 +1.5 +1.3 +1.4
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