Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF7354 and GFF7355 are separated by 15 nucleotidesGFF7355 and GFF7356 are separated by 182 nucleotidesGFF7356 and GFF7357 overlap by 4 nucleotidesGFF7357 and GFF7358 overlap by 17 nucleotides GFF7354 - 1,2-phenylacetyl-CoA epoxidase, subunit B (EC 1.14.13.149), at 2,945 to 3,238 GFF7354 GFF7355 - 1,2-phenylacetyl-CoA epoxidase, subunit A (EC 1.14.13.149), at 3,254 to 4,243 GFF7355 GFF7356 - Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1), at 4,426 to 5,151 GFF7356 GFF7357 - Phenylacetate ABC transporter, ATP-binding protein 1, at 5,148 to 5,912 GFF7357 GFF7358 - Phenylacetate ABC transporter, permease protein 2, at 5,896 to 6,864 GFF7358
Group Condition GFF7354 GFF7355 GFF7356 GFF7357 GFF7358
complex community Community=Locust bean gum; Passage=4 -0.3 +0.1 -2.0 -4.2 +0.4
complex community Community=Locust bean gum; Passage=4 +0.3 -0.5 -0.1 -3.3 +0.0
complex community Community=Locust bean gum; Passage=4 +0.7 -0.7 -1.1 -1.9 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.0 -0.4 -0.9 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.4 -0.1 -1.3 +0.3
complex community Community=Kojac gum; Passage=1 +0.2 -0.2 +0.0 -1.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 -0.1 -0.3 -1.2 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.3 +0.1 -0.5 -0.5 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.0 -0.4 -0.3 -0.1
complex community Community=guar; Passage=4 +0.2 +0.6 -0.8 -1.0 +0.0
vitamin M9 with Supernatant from Cyptococcus +0.0 -0.3 -0.4 -0.1 -0.3
complex community Community=Locust bean gum; Passage=4 -0.8 +0.4 +0.6 -0.7 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.0 -0.1 -0.9 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 -0.3 -0.5 -0.3 +0.2
complex community Community=arabino-guar; Passage=4 -0.1 -0.1 -0.5 -0.6 +0.6
vitamin M9 with Supernatant from Cyptococcus +0.3 -0.1 -0.6 -0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 -0.4 -0.2 +0.0 -0.2
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.2 -0.6 -0.1 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 -0.0 -0.6 -0.3 +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.3 +0.0 -0.5 -0.3 -0.0
complex community Community=arabino-guar; Passage=4 +0.2 -0.3 +0.2 -0.9 +0.4
no phage control no phage control -0.2 +0.0 +0.2 -0.5 +0.1
phage phage_bap4 -0.3 +0.2 +0.2 -0.2 +0.1
complex community Community=guar; Passage=4 -0.1 -0.2 -0.7 +0.8 +0.2
complex community Community=arabino-guar; Passage=4 +0.2 +0.1 -0.7 -0.7 +1.2
complex community Community=guar; Passage=4 +0.9 +0.4 -0.3 -0.7 +0.2
phage phage_bap4 +0.4 +0.0 +0.1 +0.3 +0.1
complex community Community=Kojac gum; Passage=4 -0.1 +0.1 +0.1 +0.7 +0.1
complex community Community=arabino-guar; Passage=4 -0.4 +0.1 +0.8 +0.2 +0.4
complex community Community=guar; Passage=4 +0.8 -0.3 +0.9 +1.5 -0.1
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