Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF7338 and GFF7339 overlap by 4 nucleotidesGFF7339 and GFF7340 are separated by 4 nucleotidesGFF7340 and GFF7341 are separated by 207 nucleotidesGFF7341 and GFF7342 overlap by 4 nucleotides GFF7338 - ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate), at 7,130 to 7,957 GFF7338 GFF7339 - ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate), at 7,954 to 8,781 GFF7339 GFF7340 - ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate), at 8,786 to 9,877 GFF7340 GFF7341 - no description, at 10,085 to 10,207 GFF7341 GFF7342 - Oxidoreductase, at 10,204 to 11,664 GFF7342
Group Condition GFF7338 GFF7339 GFF7340 GFF7341 GFF7342
complex community Community=arabino-guar; Passage=4 N.D. -3.9 +0.0 N.D. +0.3
complex community Community=Locust bean gum; Passage=4 N.D. -3.1 +0.7 N.D. +0.0
complex community Community=arabino-guar; Passage=4 N.D. -2.2 +0.3 N.D. -0.2
complex community Community=guar; Passage=4 N.D. -1.7 -0.1 N.D. +0.6
complex community Community=guar; Passage=4 N.D. -1.8 +0.3 N.D. +0.5
phage phage_bap4 N.D. -0.6 -0.3 N.D. -0.1
complex community Community=Locust bean gum; Passage=4 N.D. -1.8 +1.1 N.D. -0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -1.2 +0.2 N.D. +0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.8 -0.3 N.D. +0.4
complex community Community=Kojac gum; Passage=4 N.D. -1.3 +0.1 N.D. +1.0
complex community Community=Locust bean gum; Passage=4 N.D. -1.5 +1.6 N.D. -0.1
vitamin M9 with Supernatant from Cyptococcus N.D. +0.7 -0.7 N.D. +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.3 -0.2 N.D. +0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.2 -0.5 N.D. +0.4
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.8 +0.5 N.D. +0.4
complex community Community=Locust bean gum; Passage=4 N.D. +0.7 -0.6 N.D. -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.4 +0.2 N.D. +0.4
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.6 -0.6 N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.3 -0.4 N.D. +0.6
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. +0.2 -0.4 N.D. +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.2 +0.2 N.D. +0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +1.0 -0.3 N.D. +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +1.0 -0.1 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.5 -0.2 N.D. +0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.9 -0.5 N.D. +0.4
complex community Community=arabino-guar; Passage=4 N.D. +1.0 +0.3 N.D. -0.4
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.2 +0.2 N.D. +0.5
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +1.3 -0.4 N.D. +0.2
complex community Community=arabino-guar; Passage=4 N.D. +1.7 +0.0 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +1.1 +0.2 N.D. +0.8
remove
GFF7338
plot		 remove
GFF7339
plot		 remove
GFF7340		 remove
GFF7341
plot		 remove
GFF7342
plot