Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF7335 and GFF7336 are separated by 41 nucleotidesGFF7336 and GFF7337 are separated by 194 nucleotidesGFF7337 and GFF7338 overlap by 8 nucleotidesGFF7338 and GFF7339 overlap by 4 nucleotides GFF7335 - no description, at 4,857 to 5,003 GFF7335 GFF7336 - Alkanesulfonate utilization operon LysR-family regulator Cbl, at 5,045 to 5,980 GFF7336 GFF7337 - ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines), at 6,175 to 7,137 GFF7337 GFF7338 - ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate), at 7,130 to 7,957 GFF7338 GFF7339 - ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate), at 7,954 to 8,781 GFF7339
Group Condition GFF7335 GFF7336 GFF7337 GFF7338 GFF7339
complex community Community=arabino-guar; Passage=4 -1.8 -1.4 +0.0 N.D. -3.9
complex community Community=guar; Passage=4 -3.3 +0.1 +0.2 N.D. -1.8
complex community Community=arabino-guar; Passage=4 -2.0 -0.1 +0.4 N.D. -2.2
complex community Community=Locust bean gum; Passage=4 -0.6 -0.4 +0.5 N.D. -3.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -2.4 -0.3 -0.3 N.D. -0.2
complex community Community=Locust bean gum; Passage=4 -1.2 +1.1 -0.7 N.D. -1.5
complex community Community=guar; Passage=4 -0.6 -0.1 +0.2 N.D. -1.7
complex community Community=Locust bean gum; Passage=4 -1.4 -0.6 +1.7 N.D. -1.8
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.5 +0.2 -0.3 N.D. -1.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -1.1 +0.3 -0.5 N.D. -0.2
phage phage_bap4 -0.6 +0.2 -0.4 N.D. -0.5
vitamin M9 with calcium pantothenate 10 mg/mL -0.6 +0.0 +0.2 N.D. -0.8
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.5 +0.2 N.D. -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.9 -0.2 +0.4 N.D. -0.4
vitamin M9 with calcium pantothenate 10 mg/mL -1.3 +0.0 +0.3 N.D. +0.2
complex community Community=guar; Passage=4 +1.2 -1.7 +0.2 N.D. -0.2
complex community Community=Locust bean gum; Passage=1 -0.9 -0.2 +0.4 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.9 +0.0 +0.5 N.D. +0.1
vitamin M9 with Supernatant from Cyptococcus -0.5 -0.5 +0.8 N.D. +0.0
complex community Community=Locust bean gum; Passage=4 -0.7 +0.3 -0.2 N.D. +0.7
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.3 +0.6 N.D. +0.2
complex community Community=Kojac gum; Passage=4 +0.7 -0.3 +1.3 N.D. -1.3
phage phage_bap4 +0.3 +0.1 +0.6 N.D. -0.6
vitamin M9 with calcium pantothenate 10 mg/mL -0.7 +0.1 +0.2 N.D. +1.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.0 -0.4 N.D. +1.1
phage phage_bap4 +0.4 +0.3 -0.3 N.D. +0.5
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.0 +0.6 N.D. +0.9
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.4 +0.2 N.D. +1.0
complex community Community=arabino-guar; Passage=4 +0.7 -0.4 +0.8 N.D. +1.7
complex community Community=arabino-guar; Passage=4 +0.6 +0.8 +0.6 N.D. +1.0
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