Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF7333 and GFF7334 are separated by 37 nucleotidesGFF7334 and GFF7335 are separated by 139 nucleotidesGFF7335 and GFF7336 are separated by 41 nucleotidesGFF7336 and GFF7337 are separated by 194 nucleotides GFF7333 - Transcriptional regulator, MerR family, at 3,229 to 3,717 GFF7333 GFF7334 - Nucleoside-diphosphate-sugar epimerases, at 3,755 to 4,717 GFF7334 GFF7335 - no description, at 4,857 to 5,003 GFF7335 GFF7336 - Alkanesulfonate utilization operon LysR-family regulator Cbl, at 5,045 to 5,980 GFF7336 GFF7337 - ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines), at 6,175 to 7,137 GFF7337
Group Condition GFF7333 GFF7334 GFF7335 GFF7336 GFF7337
complex community Community=arabino-guar; Passage=4 -0.1 +0.0 -1.8 -1.4 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 +0.0 -2.4 -0.3 -0.3
complex community Community=guar; Passage=4 +0.1 +0.7 -3.3 +0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.3 -1.1 +0.3 -0.5
no phage control no phage control +0.2 +0.1 -0.0 -0.5 -0.8
vitamin M9 with Supernatant from Cyptococcus +0.4 -0.2 -0.3 -0.8 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.0 -1.0 -0.0 +0.2
complex community Community=arabino-guar; Passage=4 +0.3 +0.5 -2.0 -0.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.2 -1.3 +0.0 +0.3
complex community Community=Locust bean gum; Passage=1 -0.1 +0.0 -0.9 -0.2 +0.4
complex community Community=guar; Passage=4 -0.4 +0.1 +1.2 -1.7 +0.2
phage phage_bap4 +0.2 +0.1 -0.6 +0.2 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 +0.1 -0.9 -0.2 +0.4
complex community Community=Locust bean gum; Passage=4 +0.0 +0.4 -1.2 +1.1 -0.7
phage phage_bap4 -0.1 -0.2 -0.6 +0.2 +0.2
complex community Community=guar; Passage=4 -0.4 +0.5 -0.6 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.2 -0.9 +0.0 +0.5
complex community Community=Locust bean gum; Passage=4 +0.5 +0.0 -0.7 +0.3 -0.2
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.2 -0.5 -0.5 +0.8
complex community Community=Locust bean gum; Passage=4 -0.0 +0.4 -0.6 -0.4 +0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.4 +0.2 -0.5 +0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.1 -0.3 -0.3 +0.6
phage phage_bap4 -0.4 +0.1 +0.4 +0.3 -0.3
complex community Community=Kojac gum; Passage=4 -0.7 -0.7 +0.7 -0.3 +1.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.5 +0.0 +0.4 +0.3 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.3 +0.3 +0.3 -0.2 +0.4
complex community Community=arabino-guar; Passage=4 -0.4 -0.4 +0.6 +0.8 +0.6
phage phage_bap4 -0.1 +0.3 +0.3 +0.1 +0.6
complex community Community=Locust bean gum; Passage=4 +0.8 +0.9 -1.4 -0.6 +1.7
complex community Community=arabino-guar; Passage=4 +0.3 +0.1 +0.7 -0.4 +0.8
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