Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF7308 and GFF7309 are separated by 99 nucleotidesGFF7309 and GFF7310 are separated by 62 nucleotidesGFF7310 and GFF7311 are separated by 47 nucleotidesGFF7311 and GFF7312 are separated by 20 nucleotides GFF7308 - Uncharacterized MFS-type transporter, at 2,439 to 3,662 GFF7308 GFF7309 - Transcriptional regulator, LysR family, at 3,762 to 4,712 GFF7309 GFF7310 - tRNA-(cytosine32)-2-thiocytidine synthetase TtcA, at 4,775 to 5,707 GFF7310 GFF7311 - Putative transmembrane lipoprotein, at 5,755 to 6,375 GFF7311 GFF7312 - Phosphoglycerate mutase (EC 5.4.2.11), at 6,396 to 7,040 GFF7312
Group Condition GFF7308 GFF7309 GFF7310 GFF7311 GFF7312
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 -0.1 +0.1 -0.0 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.0 -0.1 +0.0 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 -0.2 +0.1 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 +0.1 -0.0 -0.0 -0.6
phage phage_bap4 -0.0 +0.3 +0.0 +0.0 -0.6
complex community Community=Kojac gum; Passage=4 -0.1 -0.2 -0.4 +0.0 +0.4
complex community Community=arabino-guar; Passage=4 -0.5 -0.2 +0.0 +0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.3 +0.0 +0.1 -0.5
phage phage_bap4 -0.1 +0.2 -0.1 +0.0 -0.3
phage phage_bap4 -0.1 +0.2 -0.2 -0.1 -0.1
no phage control no phage control +0.0 +0.3 -0.0 +0.0 -0.6
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 +0.1 +0.1 +0.1 -0.6
complex community Community=Locust bean gum; Passage=4 +0.6 -0.6 -0.1 +0.0 -0.0
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.0 +0.1 +0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 +0.0 +0.1 +0.1 -0.5
complex community Community=Locust bean gum; Passage=4 -0.1 -0.6 -0.1 +0.3 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 +0.1 +0.1 -0.0 -0.4
complex community Community=arabino-guar; Passage=4 +0.1 -0.3 +0.0 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 -0.2 +0.0 +0.0 +0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.0 +0.3 -0.0 +0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.4 +0.1 -0.0 +0.0 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 +0.2 +0.2 +0.1 -0.6
complex community Community=guar; Passage=4 +0.6 -0.3 -0.0 +0.2 -0.3
complex community Community=arabino-guar; Passage=4 -0.2 +0.0 -0.0 +0.1 +0.4
complex community Community=guar; Passage=4 +0.0 -0.2 -0.1 +0.1 +0.6
phage phage_bap4 +0.0 +0.2 -0.2 +0.0 +0.4
complex community Community=Locust bean gum; Passage=4 +0.1 -0.0 -0.0 +0.1 +0.6
complex community Community=arabino-guar; Passage=4 +0.4 +0.1 +0.0 -0.1 +0.7
complex community Community=guar; Passage=4 +0.4 +0.5 +0.2 -0.1 +0.5
complex community Community=Locust bean gum; Passage=4 +0.8 +0.3 -0.2 +0.2 +0.5
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