Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF7293 and GFF7294 are separated by 189 nucleotidesGFF7294 and GFF7295 are separated by 95 nucleotidesGFF7295 and GFF7296 are separated by 48 nucleotidesGFF7296 and GFF7297 are separated by 89 nucleotides GFF7293 - Ribosome hibernation promoting factor Hpf, at 13,122 to 13,451 GFF7293 GFF7294 - PTS IIA-like nitrogen-regulatory protein PtsN, at 13,641 to 14,108 GFF7294 GFF7295 - HPr kinase/phosphorylase, at 14,204 to 15,163 GFF7295 GFF7296 - Ferric uptake regulation protein FUR, at 15,212 to 15,631 GFF7296 GFF7297 - Outer membrane beta-barrel assembly protein BamE, at 15,721 to 16,287 GFF7297
Group Condition GFF7293 GFF7294 GFF7295 GFF7296 GFF7297
no phage control no phage control +0.0 -3.2 -2.0 N.D. N.D.
complex community Community=arabino-guar; Passage=4 -1.1 -2.7 -0.6 N.D. N.D.
phage phage_bap4 -0.3 -2.2 -1.9 N.D. N.D.
no phage control no phage control -0.1 -2.4 -1.7 N.D. N.D.
no phage control no phage control -0.1 -2.0 -2.1 N.D. N.D.
complex community Community=Kojac gum; Passage=4 -1.8 -2.2 -0.2 N.D. N.D.
phage phage_bap4 -0.1 -1.9 -2.2 N.D. N.D.
complex community Community=arabino-guar; Passage=4 -1.4 -2.3 -0.4 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 -1.6 -2.5 N.D. N.D.
complex community Community=guar; Passage=4 -1.1 -2.4 -0.6 N.D. N.D.
phage phage_bap4 -0.0 -1.6 -2.4 N.D. N.D.
phage phage_bap4 -0.2 -1.8 -2.0 N.D. N.D.
complex community Community=arabino-guar; Passage=4 -1.2 -2.3 -0.2 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -1.0 -2.5 N.D. N.D.
complex community Community=Locust bean gum; Passage=4 -1.2 -2.2 -0.2 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.8 -2.5 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -1.3 -2.1 N.D. N.D.
complex community Community=Locust bean gum; Passage=4 -0.9 -2.2 -0.2 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.4 -2.6 N.D. N.D.
complex community Community=guar; Passage=4 -0.6 -2.3 -0.3 N.D. N.D.
complex community Community=Locust bean gum; Passage=4 -1.2 -1.8 -0.1 N.D. N.D.
phage phage_bap4 -0.4 -0.5 -2.3 N.D. N.D.
complex community Community=guar; Passage=4 -1.3 -1.5 -0.3 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus +0.0 -0.2 -3.0 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.9 -2.0 N.D. N.D.
complex community Community=Locust bean gum; Passage=4 -1.2 -1.8 -0.2 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.3 -3.0 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.7 -2.3 N.D. N.D.
no phage control no phage control +0.2 -1.3 -1.9 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 -0.2 -2.8 N.D. N.D.
remove
GFF7293
plot		 remove
GFF7294
plot		 remove
GFF7295		 remove
GFF7296
plot		 remove
GFF7297
plot