Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF7271 and GFF7272 are separated by 19 nucleotidesGFF7272 and GFF7273 are separated by 367 nucleotidesGFF7273 and GFF7274 overlap by 4 nucleotidesGFF7274 and GFF7275 are separated by 93 nucleotides GFF7271 - Transcriptional regulator, LacI family, at 19,913 to 20,887 GFF7271 GFF7272 - D-glucarate permease, at 20,907 to 22,256 GFF7272 GFF7273 - UDP-glucose 4-epimerase (EC 5.1.3.2), at 22,624 to 23,481 GFF7273 GFF7274 - hypothetical protein, at 23,478 to 24,575 GFF7274 GFF7275 - no description, at 24,669 to 24,794 GFF7275
Group Condition GFF7271 GFF7272 GFF7273 GFF7274 GFF7275
complex community Community=arabino-guar; Passage=4 -1.5 -0.4 -1.2 -0.2 N.D.
complex community Community=guar; Passage=4 -2.0 +0.1 -0.4 +0.1 N.D.
complex community Community=arabino-guar; Passage=4 -1.1 -0.3 +0.2 -0.1 N.D.
no phage control no phage control -0.4 -0.3 -0.3 -0.1 N.D.
complex community Community=Locust bean gum; Passage=4 -0.9 -0.3 +0.1 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.4 -0.0 -0.5 N.D.
phage phage_bap4 -0.5 -0.1 +0.1 -0.4 N.D.
phage phage_bap4 -0.3 +0.0 -0.4 -0.2 N.D.
phage phage_bap4 -0.1 -0.1 -0.3 -0.4 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.4 -0.4 +0.1 -0.0 N.D.
complex community Community=guar; Passage=4 -1.0 -0.4 +0.3 +0.4 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.2 -0.1 -0.3 -0.3 N.D.
phage phage_bap4 -0.4 -0.1 -0.2 +0.2 N.D.
complex community Community=arabino-guar; Passage=4 -1.0 +0.2 +0.2 +0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.1 -0.6 +0.1 N.D.
complex community Community=Kojac gum; Passage=4 +0.0 +0.7 -0.4 -0.6 N.D.
complex community Community=arabino-guar; Passage=4 -0.4 -0.1 +0.8 -0.4 N.D.
complex community Community=Locust bean gum; Passage=4 -0.3 +0.6 -0.5 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 -0.1 +0.3 +0.0 N.D.
complex community Community=guar; Passage=4 -0.0 -0.2 -0.3 +0.4 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 +0.1 -0.1 -0.4 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.2 +0.4 -0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.1 +0.4 -0.3 N.D.
complex community Community=guar; Passage=4 -0.3 +0.7 -0.2 -0.2 N.D.
complex community Community=Kojac gum; Passage=1 +0.1 -0.2 -0.2 +0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus -0.5 +0.2 +0.2 +0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 -0.1 +0.3 +0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 +0.0 +0.5 +0.1 N.D.
complex community Community=Locust bean gum; Passage=4 -0.3 +0.2 +0.0 +0.8 N.D.
complex community Community=Locust bean gum; Passage=4 +0.0 +0.4 -0.0 +1.1 N.D.
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