Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF7267 and GFF7268 are separated by 39 nucleotidesGFF7268 and GFF7269 are separated by 157 nucleotidesGFF7269 and GFF7270 are separated by 59 nucleotidesGFF7270 and GFF7271 are separated by 220 nucleotides GFF7267 - L-talarate dehydratase @ Galactarate dehydratase (EC 4.2.1.42), at 14,374 to 15,573 GFF7267 GFF7268 - BUG/TctC family periplasmic protein, at 15,613 to 16,590 GFF7268 GFF7269 - Altronate dehydratase (EC 4.2.1.7), at 16,748 to 18,334 GFF7269 GFF7270 - Altronate dehydratase (EC 4.2.1.7), at 18,394 to 19,692 GFF7270 GFF7271 - Transcriptional regulator, LacI family, at 19,913 to 20,887 GFF7271
Group Condition GFF7267 GFF7268 GFF7269 GFF7270 GFF7271
complex community Community=Locust bean gum; Passage=4 +0.1 -0.2 -0.2 -1.2 -0.9
complex community Community=guar; Passage=4 +0.1 -0.9 -0.1 +0.1 -1.0
complex community Community=guar; Passage=4 -0.1 +0.6 -0.1 -2.0 -0.0
complex community Community=guar; Passage=4 +0.3 +0.4 +0.1 -0.4 -2.0
phage phage_bap4 -0.7 -0.3 -0.1 -0.4 +0.1
complex community Community=Locust bean gum; Passage=4 +0.1 +0.4 -0.0 -1.5 -0.3
complex community Community=Kojac gum; Passage=4 +0.1 -0.3 -0.1 -0.8 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 -0.3 +0.0 -0.2 -0.3
complex community Community=arabino-guar; Passage=4 +0.3 +0.4 -0.1 -0.1 -1.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 -0.1 -0.2 -0.2 -0.4
no phage control no phage control -0.5 +0.1 +0.0 -0.6 -0.1
phage phage_bap4 -0.5 -0.0 -0.0 -0.2 -0.1
phage phage_bap4 -0.3 -0.2 -0.1 +0.0 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 -0.0 -0.2 -0.8 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 +0.1 -0.0 -0.5 -0.0
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.3 +0.2 -0.4 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.9 +0.1 +0.0 +0.3 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -0.4 -0.2 -0.2 +0.2
no phage control no phage control -0.4 +0.2 +0.1 +0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 -0.4 +0.2 -0.3 +0.2
complex community Community=arabino-guar; Passage=4 -0.9 +0.8 +0.2 +0.6 -1.0
complex community Community=Locust bean gum; Passage=4 -0.0 +0.1 +0.5 -0.4 -0.3
complex community Community=arabino-guar; Passage=4 +0.4 -0.3 +0.5 +0.4 -1.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 -0.0 -0.2 +0.2 -0.3
vitamin M9 with Supernatant from Cyptococcus +0.3 +0.3 -0.0 -0.2 -0.5
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.5 +0.1 -0.0 -0.5 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.3 +0.2 -0.1 +0.3 -0.1
complex community Community=guar; Passage=4 -0.4 -0.0 +0.9 +0.8 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.4 +0.4 +0.1 -0.0 +0.1
complex community Community=Locust bean gum; Passage=4 +0.5 +0.3 +0.3 -0.1 +0.0
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