Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF7265 and GFF7266 are separated by 77 nucleotidesGFF7266 and GFF7267 overlap by 4 nucleotidesGFF7267 and GFF7268 are separated by 39 nucleotidesGFF7268 and GFF7269 are separated by 157 nucleotides GFF7265 - hypothetical protein, not 6-phosphogluconolactonase, at 12,192 to 13,304 GFF7265 GFF7266 - L-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.16), at 13,382 to 14,377 GFF7266 GFF7267 - L-talarate dehydratase @ Galactarate dehydratase (EC 4.2.1.42), at 14,374 to 15,573 GFF7267 GFF7268 - BUG/TctC family periplasmic protein, at 15,613 to 16,590 GFF7268 GFF7269 - Altronate dehydratase (EC 4.2.1.7), at 16,748 to 18,334 GFF7269
Group Condition GFF7265 GFF7266 GFF7267 GFF7268 GFF7269
complex community Community=Locust bean gum; Passage=4 +0.2 -4.1 +0.1 -0.2 -0.2
complex community Community=arabino-guar; Passage=4 -0.5 -3.7 -0.9 +0.8 +0.2
complex community Community=Kojac gum; Passage=4 +0.4 -2.6 +0.1 -0.3 -0.1
complex community Community=Locust bean gum; Passage=4 +0.6 -3.7 +0.5 +0.3 +0.3
phage phage_bap4 -0.2 +0.3 -0.7 -0.3 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.4 -0.5 -0.9 +0.1 +0.0
complex community Community=arabino-guar; Passage=4 +0.6 -1.8 +0.3 +0.4 -0.1
complex community Community=guar; Passage=4 +0.5 -1.3 -0.4 -0.0 +0.9
no phage control no phage control -0.1 +0.4 -0.4 +0.2 +0.1
complex community Community=guar; Passage=4 -0.1 -0.5 +0.3 +0.4 +0.1
phage phage_bap4 +0.1 +0.8 -0.3 -0.2 -0.1
no phage control no phage control -0.2 +0.6 -0.3 +0.0 +0.2
phage phage_bap4 -0.3 +0.7 +0.0 +0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.9 -0.3 -0.0 -0.0
complex community Community=guar; Passage=4 +0.5 +1.1 +0.1 -0.9 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 +0.8 +0.2 -0.4 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.3 +0.8 +0.0 -0.4 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.9 +0.0 -0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 +0.5 +0.3 +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 +0.9 +0.0 -0.1 +0.1
phage phage_bap4 +0.1 +1.0 -0.0 +0.1 +0.1
complex community Community=Locust bean gum; Passage=1 +0.6 +0.1 +0.7 +0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.4 +0.8 +0.2 -0.3 +0.2
complex community Community=arabino-guar; Passage=4 +0.5 +0.2 +0.4 -0.3 +0.5
complex community Community=Locust bean gum; Passage=4 -0.5 +1.3 +0.1 +0.4 -0.0
complex community Community=guar; Passage=4 +0.8 +0.2 -0.1 +0.6 -0.1
complex community Community=Locust bean gum; Passage=4 +0.9 -0.0 -0.0 +0.1 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.4 +0.8 +0.2 +0.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 +0.8 +0.4 +0.4 +0.1
complex community Community=arabino-guar; Passage=4 +1.0 +1.1 -0.1 +0.2 -0.0
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