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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF7242 and GFF7243 are separated by 66 nucleotides
GFF7243 and GFF7244 are separated by 226 nucleotides
GFF7244 and GFF7245 are separated by 196 nucleotides
GFF7245 and GFF7246 are separated by 1 nucleotides
GFF7242 - hypothetical protein, at 23,286 to 23,660
GFF7242
GFF7243 - HtrA protease/chaperone protein, at 23,727 to 25,010
GFF7243
GFF7244 - no description, at 25,237 to 25,764
GFF7244
GFF7245 - universal stress protein, UspA family, at 25,961 to 26,383
GFF7245
GFF7246 - HtrA protease/chaperone protein, at 26,385 to 27,824
GFF7246
Group
Condition
GFF7242
GFF7243
GFF7244
GFF7245
GFF7246
complex community
Community=Locust bean gum; Passage=4
-4.7
+0.4
N.D.
-2.0
-0.0
complex community
Community=arabino-guar; Passage=4
-1.3
-0.6
N.D.
-3.1
-0.1
complex community
Community=guar; Passage=4
-4.9
-0.2
N.D.
+0.9
-0.3
complex community
Community=guar; Passage=4
-3.0
+0.0
N.D.
+0.3
+0.0
complex community
Community=Kojac gum; Passage=4
+0.0
+0.2
N.D.
-2.9
+0.2
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
-1.4
-0.1
N.D.
+0.1
-0.2
vitamin
M9 with Supernatant from Cyptococcus
-1.2
+0.2
N.D.
-0.4
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.8
+0.1
N.D.
-0.6
-0.1
phage
phage_bap4
-0.9
+0.3
N.D.
-0.4
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-1.4
+0.0
N.D.
+0.5
-0.1
complex community
Community=Locust bean gum; Passage=4
+2.1
+0.1
N.D.
-2.9
-0.1
complex community
Community=Locust bean gum; Passage=4
+0.6
+0.7
N.D.
-1.4
-0.5
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-1.1
+0.2
N.D.
+0.6
-0.2
complex community
Community=arabino-guar; Passage=4
+0.6
+0.1
N.D.
-0.1
-0.8
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-1.6
+0.4
N.D.
+0.8
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.6
+0.1
N.D.
+0.5
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.4
-0.0
N.D.
+0.5
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.6
+0.1
N.D.
+0.6
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.9
+0.1
N.D.
+0.8
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.9
-0.1
N.D.
+0.7
+0.2
complex community
Community=guar; Passage=4
+1.3
+0.2
N.D.
-1.9
+0.4
phage
phage_bap4
-0.2
-0.4
N.D.
+0.7
+0.0
complex community
Community=guar; Passage=4
+0.0
-0.9
N.D.
+1.3
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.8
+0.3
N.D.
+0.7
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.9
+0.3
N.D.
+0.8
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.5
-0.1
N.D.
+0.9
-0.0
vitamin
M9 with Supernatant from Cyptococcus
-0.9
+0.2
N.D.
+1.1
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.6
+0.3
N.D.
+0.9
-0.1
complex community
Community=Locust bean gum; Passage=4
-0.7
+0.4
N.D.
+0.9
+0.2
phage
phage_bap4
-0.1
+0.0
N.D.
+1.3
+0.1
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