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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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500 nt
GFF7223 and GFF7224 are separated by 35 nucleotides
GFF7224 and GFF7225 are separated by 23 nucleotides
GFF7225 and GFF7226 are separated by 73 nucleotides
GFF7226 and GFF7227 are separated by 7 nucleotides
GFF7223 - Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1), at 4,815 to 5,999
GFF7223
GFF7224 - hypothetical protein, at 6,035 to 6,424
GFF7224
GFF7225 - hypothetical protein, at 6,448 to 7,422
GFF7225
GFF7226 - hypothetical protein, at 7,496 to 8,335
GFF7226
GFF7227 - no description, at 8,343 to 8,612
GFF7227
Group
Condition
GFF7223
GFF7224
GFF7225
GFF7226
GFF7227
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.5
N.D.
-0.5
+0.1
N.D.
phage
phage_bap4
-0.1
N.D.
-0.3
-0.6
N.D.
complex community
Community=Locust bean gum; Passage=4
-0.4
N.D.
-0.3
-0.2
N.D.
phage
phage_bap4
-0.3
N.D.
-0.2
-0.1
N.D.
phage
phage_bap4
-0.3
N.D.
-0.2
-0.1
N.D.
no phage control
no phage control
-0.2
N.D.
-0.4
+0.1
N.D.
phage
phage_bap4
+0.0
N.D.
-0.2
-0.3
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.1
N.D.
+0.1
-0.4
N.D.
complex community
Community=guar; Passage=4
-0.5
N.D.
+0.1
+0.0
N.D.
no phage control
no phage control
+0.1
N.D.
-0.3
-0.2
N.D.
phage
phage_bap4
+0.3
N.D.
-0.2
-0.4
N.D.
complex community
Community=Kojac gum; Passage=4
-0.3
N.D.
+0.2
-0.2
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.2
N.D.
-0.2
+0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.1
N.D.
-0.2
+0.4
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.1
N.D.
-0.3
+0.4
N.D.
phage
phage_bap4
+0.3
N.D.
-0.1
-0.1
N.D.
vitamin
M9 with Supernatant from Cyptococcus
+0.1
N.D.
+0.4
-0.3
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.2
N.D.
+0.1
+0.3
N.D.
vitamin
M9 with Supernatant from Cyptococcus
-0.3
N.D.
-0.2
+0.6
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
N.D.
-0.3
+0.5
N.D.
complex community
Community=guar; Passage=4
+0.2
N.D.
-0.4
+0.5
N.D.
complex community
Community=Locust bean gum; Passage=4
-0.2
N.D.
-0.1
+0.6
N.D.
complex community
Community=guar; Passage=4
-0.3
N.D.
-0.1
+0.8
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.0
N.D.
+0.2
+0.4
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.1
N.D.
-0.0
+0.6
N.D.
complex community
Community=arabino-guar; Passage=4
+0.2
N.D.
+0.2
+0.3
N.D.
complex community
Community=arabino-guar; Passage=4
+0.4
N.D.
+0.7
-0.1
N.D.
complex community
Community=arabino-guar; Passage=4
+0.2
N.D.
+0.4
+0.6
N.D.
complex community
Community=Locust bean gum; Passage=4
+0.5
N.D.
+0.1
+0.7
N.D.
complex community
Community=Locust bean gum; Passage=4
+1.0
N.D.
-0.1
+0.6
N.D.
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