Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF7208 and GFF7209 are separated by 15 nucleotidesGFF7209 and GFF7210 are separated by 49 nucleotidesGFF7210 and GFF7211 overlap by 11 nucleotidesGFF7211 and GFF7212 are separated by 215 nucleotides GFF7208 - ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component, at 24,533 to 25,306 GFF7208 GFF7209 - ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate), at 25,322 to 26,347 GFF7209 GFF7210 - Hydroxymethylpyrimidine ABC transporter, transmembrane component, at 26,397 to 27,191 GFF7210 GFF7211 - Nitrilotriacetate monooxygenase component A (EC 1.14.13.-), at 27,181 to 28,599 GFF7211 GFF7212 - Nitrilotriacetate monooxygenase [FMNH2], at 28,815 to 30,170 GFF7212
Group Condition GFF7208 GFF7209 GFF7210 GFF7211 GFF7212
complex community Community=arabino-guar; Passage=4 N.D. -0.4 -0.9 -0.9 -4.6
complex community Community=arabino-guar; Passage=4 N.D. +0.1 -4.2 -0.1 +0.9
complex community Community=arabino-guar; Passage=4 N.D. -0.2 -0.4 +0.3 -1.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -0.1 -0.7 -0.0 -0.7
complex community Community=Locust bean gum; Passage=4 N.D. -0.4 -1.1 +0.5 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.3 -0.4 -0.3 -1.0
complex community Community=Locust bean gum; Passage=4 N.D. +0.2 +0.5 -1.8 -0.2
vitamin M9 with Supernatant from Cyptococcus N.D. -0.1 -0.4 -0.4 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.0 +0.1 -0.3 -1.1
complex community Community=Locust bean gum; Passage=4 N.D. -0.2 -0.7 -0.5 +0.3
complex community Community=guar; Passage=4 N.D. -0.2 -0.6 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.1 -0.5 +0.4 -0.5
complex community Community=Kojac gum; Passage=1 N.D. -0.0 -1.0 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.1 -0.8 +0.5 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -0.2 -0.2 +0.2 -0.4
no phage control no phage control N.D. +0.2 -0.0 -0.1 -0.5
complex community Community=guar; Passage=4 N.D. +0.4 -0.8 -0.5 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.0 +0.6 -0.3 -0.3
complex community Community=guar; Passage=4 N.D. +0.0 +0.7 -0.7 +0.1
complex community Community=guar; Passage=4 N.D. -0.1 +0.9 -1.2 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.0 -0.1 -0.2 +0.5
vitamin M9 with Supernatant from Cyptococcus N.D. +0.0 +0.5 +0.1 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.1 +0.4 +0.0 -0.3
phage phage_bap4 N.D. +0.2 -0.3 +0.2 +0.2
phage phage_bap4 N.D. +0.0 -0.2 -0.0 +0.7
complex community Community=Locust bean gum; Passage=4 N.D. +0.1 -0.6 +0.3 +0.7
complex community Community=Locust bean gum; Passage=1 N.D. +0.1 -0.2 +0.2 +0.5
complex community Community=arabino-guar; Passage=4 N.D. +0.4 +0.8 -0.3 +0.0
phage phage_bap4 N.D. +0.4 +0.0 +0.3 +0.8
phage phage_bap4 N.D. +0.5 -0.0 +0.1 +0.9
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