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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF7206 and GFF7207 are separated by 106 nucleotides
GFF7207 and GFF7208 overlap by 14 nucleotides
GFF7208 and GFF7209 are separated by 15 nucleotides
GFF7209 and GFF7210 are separated by 49 nucleotides
GFF7206 - no description, at 23,838 to 24,164
GFF7206
GFF7207 - no description, at 24,271 to 24,546
GFF7207
GFF7208 - ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component, at 24,533 to 25,306
GFF7208
GFF7209 - ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate), at 25,322 to 26,347
GFF7209
GFF7210 - Hydroxymethylpyrimidine ABC transporter, transmembrane component, at 26,397 to 27,191
GFF7210
Group
Condition
GFF7206
GFF7207
GFF7208
GFF7209
GFF7210
complex community
Community=arabino-guar; Passage=4
+0.6
-0.1
N.D.
+0.1
-4.2
complex community
Community=Kojac gum; Passage=1
+0.4
-0.6
N.D.
-0.0
-1.0
complex community
Community=guar; Passage=4
+0.2
-1.1
N.D.
+0.4
-0.8
phage
phage_bap4
-1.0
-0.2
N.D.
+0.2
-0.2
complex community
Community=Locust bean gum; Passage=4
+0.2
-0.4
N.D.
-0.2
-0.7
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+1.0
-1.7
N.D.
-0.2
-0.2
complex community
Community=arabino-guar; Passage=4
-0.0
+0.3
N.D.
-0.4
-0.9
complex community
Community=guar; Passage=4
+0.1
-0.3
N.D.
-0.2
-0.6
complex community
Community=Locust bean gum; Passage=4
-0.8
+0.3
N.D.
+0.1
-0.6
complex community
Community=Locust bean gum; Passage=4
-0.2
+0.8
N.D.
-0.4
-1.1
phage
phage_bap4
-0.7
-0.3
N.D.
+0.2
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.5
-0.2
N.D.
-0.1
-0.8
phage
phage_bap4
-0.9
-0.2
N.D.
+0.4
+0.0
phage
phage_bap4
-1.0
+0.1
N.D.
+0.0
+0.3
complex community
Community=Locust bean gum; Passage=1
-0.7
+0.3
N.D.
+0.1
-0.2
vitamin
M9 with Supernatant from Cyptococcus
+0.5
-0.6
N.D.
+0.1
-0.5
complex community
Community=arabino-guar; Passage=4
+0.3
-0.1
N.D.
-0.2
-0.4
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.3
+0.1
N.D.
-0.1
-0.7
complex community
Community=guar; Passage=4
-0.7
-0.4
N.D.
+0.0
+0.7
phage
phage_bap4
-0.7
-0.1
N.D.
+0.5
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.7
-0.5
N.D.
-0.2
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.5
-0.5
N.D.
-0.0
+0.1
vitamin
M9 with Supernatant from Cyptococcus
+0.5
+0.0
N.D.
-0.1
-0.4
complex community
Community=Kojac gum; Passage=4
+0.6
-0.2
N.D.
-0.1
+0.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.8
-0.2
N.D.
-0.0
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.1
+0.2
N.D.
+0.0
+0.6
complex community
Community=guar; Passage=4
-0.1
+0.3
N.D.
-0.1
+0.9
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.9
+0.3
N.D.
+0.3
-0.4
complex community
Community=Locust bean gum; Passage=4
+0.7
-0.2
N.D.
+0.2
+0.5
complex community
Community=arabino-guar; Passage=4
+0.7
-0.3
N.D.
+0.4
+0.8
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