Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF7171 and GFF7172 overlap by 14 nucleotidesGFF7172 and GFF7173 are separated by 132 nucleotidesGFF7173 and GFF7174 are separated by 81 nucleotidesGFF7174 and GFF7175 are separated by 44 nucleotides GFF7171 - Transcriptional regulator DmlR, LysR family, at 35,153 to 36,091 GFF7171 GFF7172 - Manganese transport protein MntH, at 36,078 to 37,403 GFF7172 GFF7173 - Protein ygiN, at 37,536 to 37,844 GFF7173 GFF7174 - no description, at 37,926 to 38,465 GFF7174 GFF7175 - NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12), at 38,510 to 39,511 GFF7175
Group Condition GFF7171 GFF7172 GFF7173 GFF7174 GFF7175
complex community Community=Kojac gum; Passage=4 +0.1 -0.4 N.D. -1.4 N.D.
complex community Community=arabino-guar; Passage=4 +0.3 +0.1 N.D. -1.7 N.D.
complex community Community=arabino-guar; Passage=4 -0.1 -0.8 N.D. +0.0 N.D.
complex community Community=Locust bean gum; Passage=4 -0.4 -1.3 N.D. +1.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.1 N.D. -0.6 N.D.
complex community Community=Kojac gum; Passage=1 -0.1 -0.0 N.D. -0.4 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.0 +0.1 N.D. -0.6 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 +0.2 N.D. -0.5 N.D.
complex community Community=arabino-guar; Passage=4 -0.5 +0.1 N.D. +0.2 N.D.
complex community Community=Locust bean gum; Passage=4 +0.2 -0.5 N.D. +0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 +0.2 N.D. -0.3 N.D.
complex community Community=guar; Passage=4 +0.4 +0.1 N.D. -0.5 N.D.
complex community Community=Locust bean gum; Passage=1 -0.1 +0.2 N.D. -0.2 N.D.
complex community Community=guar; Passage=4 +0.1 -0.2 N.D. +0.2 N.D.
phage phage_bap4 -0.0 -0.2 N.D. +0.3 N.D.
complex community Community=guar; Passage=4 +0.1 +0.2 N.D. -0.2 N.D.
phage phage_bap4 +0.0 -0.4 N.D. +0.6 N.D.
no phage control no phage control -0.1 -0.2 N.D. +0.5 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 -0.3 N.D. +0.6 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.1 N.D. +0.4 N.D.
phage phage_bap4 +0.0 -0.3 N.D. +0.5 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.0 -0.3 N.D. +0.5 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 -0.2 N.D. +0.5 N.D.
phage phage_bap4 +0.1 -0.1 N.D. +0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 -0.3 N.D. +0.6 N.D.
complex community Community=Locust bean gum; Passage=4 -0.1 -0.2 N.D. +0.8 N.D.
phage phage_bap4 +0.1 -0.1 N.D. +0.5 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 +0.4 N.D. +0.3 N.D.
phage phage_bap4 +0.1 +0.3 N.D. +0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 +0.2 N.D. +0.5 N.D.
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