Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 552 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_03625	PS417_03630	PS417_03635	PS417_03640	PS417_03645
solid stress	Fraxetin 3 mM; solid stress	-4.1	-0.6	N.D.	-0.1	+0.2
solid stress	Fraxetin 3 mM; solid stress	-2.3	-0.5	N.D.	-0.1	-0.2
carbon source	octanoate (C)	-1.8	-0.7	N.D.	-0.2	+0.0
solid stress	Fraxetin 3 mM; solid stress	-2.6	+0.2	N.D.	-0.1	-0.1
phage	P. simiae OR Antrim MOI 10	+0.1	-1.6	N.D.	-0.8	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.4	-1.0	N.D.	+0.0	-0.3
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5	-0.7	N.D.	-0.0	-0.3
solid stress	Fraxetin 3 mM; solid stress	-2.1	+0.6	N.D.	-0.0	-0.0
carbon source	octanoate (C)	-1.1	-0.3	N.D.	-0.0	-0.0
carbon source	L-Valine (C)	-0.5	-0.7	N.D.	-0.5	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4	-0.8	N.D.	+0.1	-0.2
stress	Benzalkonium Chloride 0.012 mg/ml	-0.6	-0.5	N.D.	+0.1	-0.2
solid stress	Fraxetin 2 mM; solid stress	-1.0	-0.2	N.D.	+0.1	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.3	-0.7	N.D.	+0.3	-0.1
stress	R2A with Fusaric 120 ug/mL	-0.8	+0.3	N.D.	+0.1	-0.3
phage	JP1 MOI 1	+0.1	-1.4	N.D.	+0.5	+0.2
phage	P. simiae ORA MOI 0.1	+0.5	-0.7	N.D.	+0.1	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5	+0.8	N.D.	-0.1	-0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.3	+0.7	N.D.	+0.1	-0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.4	+1.1	N.D.	-0.1	-0.1
seeds	Growth on radish seeds for 72 hours	-0.5	+0.5	N.D.	+0.9	-0.1
stress	methylglyoxal 0.032 vol%	-0.5	+1.3	N.D.	+0.2	-0.0
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+1.0	+0.0	N.D.	+0.2	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.7	+0.6	N.D.	-0.1	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.2	+0.9	N.D.	+0.5	-0.1
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5	+0.7	N.D.	+0.3	-0.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.8	+0.1	N.D.	+0.3	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3	+1.3	N.D.	+0.5	-0.1
root	root sample 6; outgrowth in LB	+0.3	+0.2	N.D.	+0.3	+1.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+1.6	-0.2	N.D.	+0.6	+0.3