Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF7147 and GFF7148 overlap by 4 nucleotidesGFF7148 and GFF7149 are separated by 11 nucleotidesGFF7149 and GFF7150 are separated by 14 nucleotidesGFF7150 and GFF7151 are separated by 51 nucleotides GFF7147 - Hypothetical, similar to sarcosine oxidase alpha subunit, 2Fe-2S domain, at 13,385 to 13,639 GFF7147 GFF7148 - D-amino-acid oxidase (EC 1.4.3.3), at 13,636 to 14,739 GFF7148 GFF7149 - 4-hydroxyproline epimerase (EC 5.1.1.8), at 14,751 to 15,686 GFF7149 GFF7150 - Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1), at 15,701 to 16,843 GFF7150 GFF7151 - 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22), at 16,895 to 17,809 GFF7151
Group Condition GFF7147 GFF7148 GFF7149 GFF7150 GFF7151
complex community Community=arabino-guar; Passage=4 N.D. -0.7 -0.4 -0.4 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.0 -0.5 -0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.1 -0.4 -0.0 +0.1
complex community Community=guar; Passage=4 N.D. -0.0 +0.2 -0.3 -0.3
complex community Community=arabino-guar; Passage=4 N.D. -0.1 -0.4 +0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.0 -0.3 -0.1 -0.1
complex community Community=Kojac gum; Passage=4 N.D. -0.2 -0.3 +0.3 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.3 +0.2 -0.2 +0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -0.3 -0.0 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.1 -0.3 -0.0 -0.0
complex community Community=guar; Passage=4 N.D. +0.3 -0.6 -0.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.1 -0.4 +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus N.D. +0.1 -0.4 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.1 -0.4 +0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. +0.1 -0.3 +0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.0 -0.2 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.2 -0.1 -0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.1 -0.2 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.0 -0.2 +0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus N.D. +0.2 -0.1 +0.1 -0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. +0.2 -0.0 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. +0.2 -0.1 +0.0 +0.2
complex community Community=Locust bean gum; Passage=4 N.D. +0.1 +0.1 +0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.2 +0.0 +0.0 +0.2
complex community Community=Locust bean gum; Passage=4 N.D. +0.5 +0.0 +0.1 -0.1
complex community Community=guar; Passage=4 N.D. +0.1 +0.5 +0.2 -0.2
complex community Community=arabino-guar; Passage=4 N.D. -0.4 +1.1 +0.0 -0.0
complex community Community=arabino-guar; Passage=4 N.D. +0.2 +0.4 +0.2 -0.1
complex community Community=Locust bean gum; Passage=4 N.D. +0.1 +1.5 -0.1 -0.0
complex community Community=Locust bean gum; Passage=4 N.D. +0.1 +1.4 +0.2 -0.1
remove
GFF7147
plot		 remove
GFF7148
plot		 remove
GFF7149		 remove
GFF7150
plot		 remove
GFF7151
plot