Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF7109 and GFF7110 are separated by 24 nucleotidesGFF7110 and GFF7111 are separated by 7 nucleotidesGFF7111 and GFF7112 overlap by 4 nucleotidesGFF7112 and GFF7113 are separated by 14 nucleotides GFF7109 - BUG/TctC family periplasmic protein, at 27,500 to 28,471 GFF7109 GFF7110 - no description, at 28,496 to 28,903 GFF7110 GFF7111 - hypothetical protein, at 28,911 to 30,092 GFF7111 GFF7112 - O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26), at 30,089 to 31,675 GFF7112 GFF7113 - hypothetical protein, at 31,690 to 32,223 GFF7113
Group Condition GFF7109 GFF7110 GFF7111 GFF7112 GFF7113
complex community Community=arabino-guar; Passage=4 -0.0 -0.1 -0.1 +0.1 -0.2
complex community Community=Locust bean gum; Passage=4 -0.2 -0.3 -0.0 +0.4 -0.0
complex community Community=arabino-guar; Passage=4 +0.2 +0.1 +0.0 -0.2 -0.3
complex community Community=arabino-guar; Passage=4 -0.0 +0.1 -0.1 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.0 +0.1 -0.0 -0.2 -0.1
no phage control no phage control +0.1 -0.0 +0.0 +0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 +0.1 -0.0 -0.0 -0.2
complex community Community=guar; Passage=4 -0.3 +0.4 +0.1 -0.2 -0.0
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.1 +0.0 +0.0 -0.2
complex community Community=Locust bean gum; Passage=4 +0.2 -0.1 +0.0 -0.2 -0.1
complex community Community=Kojac gum; Passage=1 -0.1 +0.0 +0.1 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 +0.2 -0.0 -0.1 -0.1
phage phage_bap4 +0.2 -0.1 +0.0 +0.0 -0.1
no phage control no phage control +0.2 -0.1 -0.0 +0.0 -0.1
complex community Community=guar; Passage=4 -0.2 +0.2 +0.1 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.2 +0.0 -0.0 -0.2
complex community Community=guar; Passage=4 +0.1 -0.1 +0.1 +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 +0.1 +0.1 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 +0.3 -0.0 +0.0 -0.0
vitamin M9 with Supernatant from Cyptococcus +0.0 +0.2 -0.0 +0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 +0.2 +0.0 -0.1 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 +0.1 +0.1 +0.1 -0.1
complex community Community=arabino-guar; Passage=4 +0.3 +0.1 +0.1 -0.1 -0.1
complex community Community=Locust bean gum; Passage=4 +0.2 +0.1 +0.2 -0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 +0.2 +0.1 -0.1 +0.0
complex community Community=Locust bean gum; Passage=4 +0.1 -0.1 +0.0 -0.4 +0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.2 -0.0 +0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.1 +0.1 -0.0 +0.2
complex community Community=Kojac gum; Passage=4 -0.1 +0.2 +0.0 +0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.2 +0.1 +0.0 +0.1 +0.1
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