Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF7098 and GFF7099 are separated by 47 nucleotidesGFF7099 and GFF7100 are separated by 1 nucleotidesGFF7100 and GFF7101 are separated by 2 nucleotidesGFF7101 and GFF7102 are separated by 33 nucleotides GFF7098 - 2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC 4.2.-.-), at 17,389 to 18,222 GFF7098 GFF7099 - 5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10), at 18,270 to 18,701 GFF7099 GFF7100 - similar to protocatechuate 4,5-dioxygenase beta chain, at 18,703 to 19,521 GFF7100 GFF7101 - hypothetical protein, at 19,524 to 19,850 GFF7101 GFF7102 - 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (EC 1.2.1.60), at 19,884 to 21,350 GFF7102
Group Condition GFF7098 GFF7099 GFF7100 GFF7101 GFF7102
complex community Community=Locust bean gum; Passage=4 -0.1 -0.5 -1.0 -0.4 -0.1
complex community Community=arabino-guar; Passage=4 -0.0 +0.2 -1.6 -0.4 -0.0
complex community Community=guar; Passage=4 +0.1 -0.1 -0.1 -0.5 -0.4
complex community Community=Locust bean gum; Passage=4 +0.1 -0.8 +0.4 +0.1 -0.7
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.1 -0.1 -0.4 -0.2
complex community Community=guar; Passage=4 +0.1 +0.0 -0.1 -0.7 +0.0
phage phage_bap4 +0.0 +0.1 -0.4 -0.0 -0.3
no phage control no phage control +0.1 +0.1 -0.7 +0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 -0.3 +0.1 -0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.5 +0.1 -0.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 -0.0 -0.4 -0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 +0.0 -0.8 +0.0 +0.0
phage phage_bap4 +0.2 +0.1 -0.3 -0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 -0.4 +0.3 -0.0 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.4 -0.5 +0.1 -0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.7 +0.3 +0.0 -0.1
complex community Community=Locust bean gum; Passage=4 +0.1 +0.3 +0.8 -0.3 -0.9
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 -0.3 +0.1 -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.3 +0.6 -0.2 -0.1
complex community Community=Locust bean gum; Passage=4 +0.2 -0.3 +0.8 -0.3 -0.3
complex community Community=guar; Passage=4 +0.1 -0.4 +1.3 -0.3 -0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.2 -0.1 +0.5 +0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 -0.1 +0.8 -0.3 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 -0.4 +0.4 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 -0.1 +0.4 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 -0.2 +0.4 +0.0 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 -0.0 +0.7 -0.2 +0.0
complex community Community=Kojac gum; Passage=4 +0.1 +0.0 +0.3 +0.5 -0.2
complex community Community=guar; Passage=4 +0.1 +0.4 +0.9 -0.3 -0.2
complex community Community=arabino-guar; Passage=4 -0.2 +0.5 +1.2 -0.1 +0.0
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