Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF708 and GFF709 overlap by 1 nucleotidesGFF709 and GFF710 are separated by 90 nucleotidesGFF710 and GFF711 overlap by 4 nucleotidesGFF711 and GFF712 overlap by 4 nucleotides GFF708 - Oxidoreductase, GMC family, at 765,571 to 767,286 GFF708 GFF709 - ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose), at 767,286 to 768,446 GFF709 GFF710 - Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1), at 768,537 to 769,481 GFF710 GFF711 - KEGG: ribose transport system permease protein, at 769,478 to 770,443 GFF711 GFF712 - ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose), at 770,440 to 771,990 GFF712
Group Condition GFF708 GFF709 GFF710 GFF711 GFF712
complex community Community=Locust bean gum; Passage=4 +0.1 -0.3 -1.2 -0.4 -0.1
complex community Community=Locust bean gum; Passage=4 +0.1 +0.1 -1.5 -0.4 -0.2
complex community Community=arabino-guar; Passage=4 -0.4 -0.2 -0.8 +0.0 -0.3
complex community Community=arabino-guar; Passage=4 -0.1 +0.3 -0.8 -0.5 -0.4
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.2 -0.2 -0.3 -0.4
complex community Community=Locust bean gum; Passage=4 +0.1 -0.0 -0.7 +0.2 -0.6
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.0 -0.5 -0.4 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 -0.2 -0.3 -0.3 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 -0.1 -0.2 -0.3 -0.2
complex community Community=Kojac gum; Passage=1 -0.1 +0.1 -0.4 -0.2 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.1 -0.4 -0.0 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 +0.0 -0.3 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 +0.0 +0.1 -0.2 -0.5
complex community Community=Locust bean gum; Passage=1 -0.1 +0.1 -0.4 -0.2 +0.1
complex community Community=guar; Passage=4 +0.1 -0.3 +0.1 -0.1 -0.3
complex community Community=guar; Passage=4 -0.2 -0.1 +0.0 +0.3 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.1 -0.4 -0.1 +0.1
complex community Community=arabino-guar; Passage=4 -0.4 -0.2 +0.6 +0.2 -0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -0.0 -0.5 +0.0 -0.0
complex community Community=guar; Passage=4 -0.2 +0.1 -0.2 -0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.0 -0.3 +0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 +0.1 -0.0 -0.4 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 +0.0 +0.3 -0.2 -0.3
complex community Community=Locust bean gum; Passage=4 -0.2 +0.1 -0.1 -0.4 +0.5
no phage control no phage control -0.0 +0.0 +0.4 -0.1 +0.1
complex community Community=Kojac gum; Passage=4 -0.0 -0.2 +0.9 +0.3 -0.4
complex community Community=arabino-guar; Passage=4 +0.2 -0.0 +0.1 +0.2 +0.2
phage phage_bap4 +0.1 +0.3 +0.3 -0.0 +0.2
phage phage_bap4 +0.3 +0.3 -0.1 +0.1 +0.5
phage phage_bap4 +0.4 +0.2 +0.5 +0.3 +0.1
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