Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF7086 and GFF7087 are separated by 116 nucleotidesGFF7087 and GFF7088 are separated by 26 nucleotidesGFF7088 and GFF7089 are separated by 4 nucleotidesGFF7089 and GFF7090 are separated by 23 nucleotides GFF7086 - Transcriptional regulator, IclR family, at 8,656 to 9,429 GFF7086 GFF7087 - oxidoreductase FAD/NAD(P)-binding domain protein, at 9,546 to 10,562 GFF7087 GFF7088 - Benzoate 1,2-dioxygenase alpha subunit (EC 1.14.12.10), at 10,589 to 11,956 GFF7088 GFF7089 - Putative short-chain dehydrogenase, at 11,961 to 12,749 GFF7089 GFF7090 - Small subunit naph/bph dioxygenase, at 12,773 to 13,366 GFF7090
Group Condition GFF7086 GFF7087 GFF7088 GFF7089 GFF7090
complex community Community=arabino-guar; Passage=4 -0.6 -0.3 +0.2 -0.4 -0.5
complex community Community=arabino-guar; Passage=4 +0.1 -0.3 -0.1 -0.3 -0.1
complex community Community=arabino-guar; Passage=4 -0.2 +0.1 -0.1 -0.3 -0.2
complex community Community=Locust bean gum; Passage=4 +0.0 -0.3 -0.1 +0.1 -0.3
complex community Community=Kojac gum; Passage=4 -0.4 -0.3 -0.0 +0.2 +0.2
phage phage_bap4 -0.3 +0.0 -0.1 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 +0.1 -0.1 -0.2 +0.0
vitamin M9 with Supernatant from Cyptococcus -0.0 +0.1 -0.0 -0.2 -0.2
complex community Community=Locust bean gum; Passage=4 -0.3 +0.1 -0.0 +0.1 -0.2
no phage control no phage control -0.2 +0.2 -0.1 -0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 +0.1 -0.1 -0.3 +0.2
complex community Community=Locust bean gum; Passage=4 -0.1 +0.2 -0.0 -0.1 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.0 -0.1 +0.1 -0.1
complex community Community=guar; Passage=4 -0.3 +0.4 -0.0 +0.1 -0.1
no phage control no phage control -0.1 +0.1 -0.1 -0.0 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.1 +0.0 +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 -0.1 +0.1 -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.0 +0.1 -0.0 -0.1 +0.3
phage phage_bap4 -0.1 +0.1 -0.1 +0.1 +0.1
no phage control no phage control -0.0 +0.3 -0.1 +0.0 -0.0
phage phage_bap4 -0.3 +0.1 -0.0 +0.2 +0.2
complex community Community=guar; Passage=4 -0.2 +0.3 +0.1 +0.1 -0.1
complex community Community=Locust bean gum; Passage=4 +0.1 +0.2 -0.0 -0.3 +0.3
phage phage_bap4 -0.0 +0.2 -0.0 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.2 -0.0 +0.3 -0.1
complex community Community=guar; Passage=4 -0.2 -0.2 +0.1 +0.3 +0.3
phage phage_bap4 -0.1 +0.1 +0.0 +0.1 +0.2
phage phage_bap4 +0.1 +0.1 -0.0 +0.1 +0.1
complex community Community=arabino-guar; Passage=4 +0.1 +0.2 +0.1 +0.2 -0.2
complex community Community=guar; Passage=4 -0.1 -0.0 +0.1 +0.2 +0.3
remove
GFF7086
plot		 remove
GFF7087
plot		 remove
GFF7088		 remove
GFF7089
plot		 remove
GFF7090
plot