Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF7056 and GFF7057 are separated by 130 nucleotidesGFF7057 and GFF7058 are separated by 103 nucleotidesGFF7058 and GFF7059 are separated by 13 nucleotidesGFF7059 and GFF7060 are separated by 156 nucleotides GFF7056 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 16,179 to 17,078 GFF7056 GFF7057 - Uncharacterized protein conserved in bacteria, at 17,209 to 17,922 GFF7057 GFF7058 - Zinc-binding GTPase YciC, at 18,026 to 19,219 GFF7058 GFF7059 - Zinc uptake regulation protein Zur, at 19,233 to 19,733 GFF7059 GFF7060 - BUG/TctC family periplasmic protein, at 19,890 to 20,885 GFF7060
Group Condition GFF7056 GFF7057 GFF7058 GFF7059 GFF7060
complex community Community=guar; Passage=4 +0.2 +0.3 -0.1 -3.4 +0.1
complex community Community=Kojac gum; Passage=4 -0.1 +0.2 +0.4 -3.5 +0.1
complex community Community=arabino-guar; Passage=4 +0.2 +0.1 -0.6 -2.4 -0.1
complex community Community=Locust bean gum; Passage=4 -0.0 -0.0 +0.0 -1.2 -0.6
complex community Community=arabino-guar; Passage=4 +0.2 +0.2 -0.7 -0.9 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 +0.0 -0.1 -1.1 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.0 -0.1 -1.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.0 +0.1 -1.1 -0.1
complex community Community=Locust bean gum; Passage=1 +0.2 -0.0 -0.7 -0.6 +0.0
complex community Community=guar; Passage=4 +0.2 +0.2 -0.7 -0.4 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 -0.0 -0.2 -0.5 -0.0
complex community Community=Kojac gum; Passage=1 +0.3 -0.0 -0.3 -0.6 -0.0
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.0 -0.3 -0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.0 +0.3 -0.7 -0.1
phage phage_bap4 +0.0 -0.1 -0.1 -0.4 +0.1
complex community Community=Locust bean gum; Passage=4 -0.0 +0.1 -0.3 -0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.0 -0.2 +0.4 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.1 +0.3 -0.4 +0.0
vitamin M9 with Supernatant from Cyptococcus +0.0 +0.1 -0.4 +0.2 +0.2
phage phage_bap4 -0.0 -0.0 -0.4 +0.5 +0.0
phage phage_bap4 +0.2 +0.0 -0.2 +0.2 -0.1
phage phage_bap4 +0.4 -0.1 -0.4 +0.3 -0.0
complex community Community=guar; Passage=4 +0.1 -0.2 +0.4 +0.1 -0.2
complex community Community=arabino-guar; Passage=4 +0.5 -0.1 +0.2 +0.1 -0.4
complex community Community=arabino-guar; Passage=4 +0.2 +0.2 -0.1 +0.3 -0.2
complex community Community=guar; Passage=4 -0.2 +0.0 +0.4 +0.7 -0.4
no phage control no phage control +0.2 +0.1 -0.1 +0.5 -0.0
complex community Community=Locust bean gum; Passage=4 -0.1 +0.2 +0.1 +0.3 +0.2
phage phage_bap4 +0.4 -0.0 -0.2 +0.7 +0.0
complex community Community=Locust bean gum; Passage=4 +0.5 -0.0 +0.4 +0.1 -0.0
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