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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF7051 and GFF7052 are separated by 40 nucleotides
GFF7052 and GFF7053 are separated by 134 nucleotides
GFF7053 and GFF7054 are separated by 0 nucleotides
GFF7054 and GFF7055 are separated by 82 nucleotides
GFF7051 - hypothetical protein, at 11,023 to 12,126
GFF7051
GFF7052 - Uncharacterized MFS-type transporter, at 12,167 to 13,489
GFF7052
GFF7053 - Transcriptional regulator, LysR family, at 13,624 to 14,526
GFF7053
GFF7054 - Glutathione S-transferase domain protein, at 14,527 to 15,174
GFF7054
GFF7055 - hypothetical protein, at 15,257 to 16,135
GFF7055
Group
Condition
GFF7051
GFF7052
GFF7053
GFF7054
GFF7055
complex community
Community=Locust bean gum; Passage=4
-0.1
-0.0
-1.0
-0.7
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.1
+0.0
-0.9
-0.4
N.D.
phage
phage_bap4
-0.2
-0.1
-1.1
+0.0
N.D.
phage
phage_bap4
-0.1
-0.0
-0.4
-0.5
N.D.
complex community
Community=Locust bean gum; Passage=4
+0.5
-0.0
-0.5
-0.8
N.D.
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.1
+0.2
-0.7
-0.4
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.1
-0.0
-0.2
-0.5
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
+0.0
-0.3
-0.6
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.1
-0.1
-0.3
-0.3
N.D.
phage
phage_bap4
+0.0
+0.1
-0.2
-0.5
N.D.
phage
phage_bap4
-0.1
-0.0
-0.6
+0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.0
+0.1
-0.6
-0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
+0.2
-0.5
-0.3
N.D.
complex community
Community=arabino-guar; Passage=4
+0.5
+0.0
+0.1
-1.0
N.D.
complex community
Community=Kojac gum; Passage=4
+0.1
+0.2
-0.0
-0.7
N.D.
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.1
+0.0
-0.4
-0.2
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.2
-0.0
-0.6
-0.0
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.0
+0.1
-0.6
-0.0
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.1
+0.1
-0.1
-0.4
N.D.
vitamin
M9 with Supernatant from Cyptococcus
+0.1
+0.2
+0.1
-0.6
N.D.
complex community
Community=Locust bean gum; Passage=4
+0.5
+0.1
-1.0
+0.2
N.D.
complex community
Community=arabino-guar; Passage=4
+0.2
-0.3
+0.2
-0.3
N.D.
complex community
Community=guar; Passage=4
+0.1
-0.1
+0.4
-0.4
N.D.
phage
phage_bap4
-0.0
+0.1
+0.2
-0.3
N.D.
no phage control
no phage control
+0.1
-0.0
+0.2
-0.3
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
+0.1
-0.4
+0.2
N.D.
vitamin
M9 with Supernatant from Cyptococcus
+0.1
+0.2
-0.3
+0.2
N.D.
complex community
Community=Kojac gum; Passage=1
+0.2
-0.0
-0.1
+0.4
N.D.
complex community
Community=guar; Passage=4
+0.2
+0.1
+0.8
-0.6
N.D.
complex community
Community=arabino-guar; Passage=4
-0.1
+0.0
+0.7
+0.1
N.D.
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