Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF7034 and GFF7035 are separated by 143 nucleotidesGFF7035 and GFF7036 are separated by 9 nucleotidesGFF7036 and GFF7038 are separated by 57 nucleotidesGFF7038 and GFF7037 overlap by 6 nucleotides GFF7034 - FIG00538743: hypothetical protein, at 488 to 1,243 GFF7034 GFF7035 - UspA, at 1,387 to 1,827 GFF7035 GFF7036 - LSU rRNA pseudouridine(746) synthase (EC 5.4.99.29) @ tRNA pseudouridine(32) synthase (EC 5.4.99.28), at 1,837 to 2,508 GFF7036 GFF7038 - no description, at 2,566 to 2,721 GFF7038 GFF7037 - Uncharacterized MFS-type transporter, at 2,716 to 3,918 GFF7037
Group Condition GFF7034 GFF7035 GFF7036 GFF7038 GFF7037
complex community Community=Locust bean gum; Passage=4 -1.1 -2.6 -0.2 N.D. +0.1
complex community Community=guar; Passage=4 -0.4 -2.9 -0.5 N.D. +0.4
complex community Community=guar; Passage=4 -1.5 -1.7 -0.1 N.D. +0.2
complex community Community=guar; Passage=4 -0.9 -1.7 -0.1 N.D. -0.0
complex community Community=guar; Passage=4 -0.5 -2.3 +0.1 N.D. +0.1
complex community Community=Locust bean gum; Passage=4 -0.2 -1.9 -0.7 N.D. +0.2
complex community Community=Locust bean gum; Passage=4 -0.4 -1.4 -0.4 N.D. +0.0
complex community Community=Locust bean gum; Passage=4 -0.5 -1.2 -0.1 N.D. -0.2
complex community Community=arabino-guar; Passage=4 -0.7 -0.9 +0.3 N.D. -0.1
complex community Community=arabino-guar; Passage=4 -0.0 -1.1 +0.7 N.D. -0.4
complex community Community=Kojac gum; Passage=4 -0.2 -0.6 +0.1 N.D. -0.3
complex community Community=arabino-guar; Passage=4 +0.2 -1.1 +0.2 N.D. +0.1
vitamin M9 with Supernatant from Cyptococcus -0.4 -0.2 +0.1 N.D. +0.0
phage phage_bap4 -0.0 -0.3 -0.2 N.D. +0.1
complex community Community=Locust bean gum; Passage=1 -0.3 -0.2 +0.2 N.D. +0.0
complex community Community=arabino-guar; Passage=4 +0.5 -1.2 +0.3 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.3 -0.1 N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 -0.1 -0.2 N.D. +0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 -0.3 +0.3 N.D. +0.3
phage phage_bap4 +0.3 +0.1 -0.3 N.D. -0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 +0.2 +0.2 N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 +0.0 -0.2 N.D. +0.2
phage phage_bap4 +0.3 -0.3 +0.2 N.D. +0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.1 -0.1 N.D. +0.2
no phage control no phage control +0.5 -0.0 -0.1 N.D. +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 +0.3 +0.3 N.D. -0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.1 +0.2 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 +0.2 -0.1 N.D. +0.3
no phage control no phage control +0.3 +0.2 +0.4 N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 +0.1 +0.3 N.D. +0.3
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