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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF7028 and GFF7029 are separated by 567 nucleotides
GFF7029 and GFF7030 overlap by 4 nucleotides
GFF7030 and GFF7031 overlap by 1 nucleotides
GFF7031 and GFF7032 are separated by 1455 nucleotides
GFF7028 - Cardiolipin synthase (EC 2.7.8.-) phosphatidylethanolamine-utilizing, bacterial type ClsC, at 43,654 to 44,097
GFF7028
GFF7029 - hypothetical protein, at 44,665 to 46,230
GFF7029
GFF7030 - no description, at 46,227 to 48,107
GFF7030
GFF7031 - hypothetical protein, at 48,107 to 50,263
GFF7031
GFF7032 - no description, at 51,719 to 52,075
GFF7032
Group
Condition
GFF7028
GFF7029
GFF7030
GFF7031
GFF7032
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.3
-0.2
-0.1
-0.1
-0.2
complex community
Community=arabino-guar; Passage=4
-0.6
+0.0
-0.3
-0.2
+0.3
complex community
Community=arabino-guar; Passage=4
+0.0
-0.1
-0.1
-0.3
-0.2
complex community
Community=Locust bean gum; Passage=1
-0.3
-0.0
+0.0
-0.2
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.0
-0.1
-0.0
-0.1
-0.1
complex community
Community=guar; Passage=4
+0.2
+0.0
-0.0
-0.2
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.0
-0.1
-0.0
-0.1
-0.1
complex community
Community=guar; Passage=4
+0.1
-0.3
+0.0
-0.3
+0.2
complex community
Community=arabino-guar; Passage=4
+0.2
-0.3
-0.3
-0.1
+0.1
phage
phage_bap4
+0.1
-0.1
+0.0
-0.1
-0.2
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.0
-0.1
-0.1
+0.1
-0.2
complex community
Community=Locust bean gum; Passage=4
-0.1
-0.2
-0.0
+0.1
+0.0
vitamin
M9 with Supernatant from Cyptococcus
+0.1
-0.0
-0.2
-0.2
+0.1
complex community
Community=Locust bean gum; Passage=4
-0.4
+0.2
+0.0
-0.2
+0.2
phage
phage_bap4
+0.2
+0.0
-0.1
-0.1
-0.2
complex community
Community=Locust bean gum; Passage=4
-0.3
-0.0
-0.1
+0.2
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.2
-0.1
-0.1
-0.0
-0.1
complex community
Community=arabino-guar; Passage=4
-0.4
-0.1
+0.1
-0.2
+0.5
complex community
Community=guar; Passage=4
+0.4
+0.0
-0.1
-0.1
-0.2
vitamin
M9 with Supernatant from Cyptococcus
+0.2
-0.1
+0.1
-0.0
-0.2
complex community
Community=Locust bean gum; Passage=4
+0.1
-0.2
+0.0
+0.1
-0.1
complex community
Community=Kojac gum; Passage=4
+0.0
+0.2
-0.2
+0.1
+0.0
no phage control
no phage control
+0.3
-0.1
-0.0
-0.1
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.0
+0.1
+0.0
-0.2
+0.2
phage
phage_bap4
+0.3
+0.0
+0.1
-0.0
-0.1
vitamin
M9 with Supernatant from Cyptococcus
+0.3
+0.1
-0.1
+0.1
-0.0
phage
phage_bap4
+0.2
+0.0
+0.0
-0.0
+0.2
no phage control
no phage control
+0.4
+0.0
-0.0
+0.1
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.2
-0.0
+0.1
+0.1
+0.1
complex community
Community=guar; Passage=4
+0.5
+0.2
+0.2
+0.3
-0.1
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