Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF7011 and GFF7012 overlap by 8 nucleotidesGFF7012 and GFF7013 are separated by 53 nucleotidesGFF7013 and GFF7014 are separated by 177 nucleotidesGFF7014 and GFF7015 are separated by 181 nucleotides GFF7011 - Taurine ABC transporter, permease protein TauC, at 26,614 to 27,510 GFF7011 GFF7012 - Taurine ABC transporter, ATP-binding protein TauB, at 27,503 to 28,291 GFF7012 GFF7013 - Taurine ABC transporter, substrate-binding protein TauA, at 28,345 to 29,355 GFF7013 GFF7014 - Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1), at 29,533 to 31,068 GFF7014 GFF7015 - protein of unknown function DUF1486, at 31,250 to 31,630 GFF7015
Group Condition GFF7011 GFF7012 GFF7013 GFF7014 GFF7015
complex community Community=arabino-guar; Passage=4 -1.6 -0.3 -0.1 -0.6 N.D.
complex community Community=Locust bean gum; Passage=4 +0.8 -1.8 -0.5 -0.3 N.D.
complex community Community=Locust bean gum; Passage=4 -0.7 -0.6 +0.2 -0.5 N.D.
phage phage_bap4 -0.9 +0.2 -0.4 -0.3 N.D.
complex community Community=guar; Passage=4 +0.2 -0.8 +0.4 -0.8 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.5 -0.2 +0.0 -0.4 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.3 -0.4 -0.1 N.D.
complex community Community=Locust bean gum; Passage=1 -0.2 -0.1 +0.0 -0.6 N.D.
complex community Community=Locust bean gum; Passage=4 +0.2 -0.9 -0.3 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.5 +0.3 -0.4 -0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -1.0 +0.1 +0.1 +0.3 N.D.
complex community Community=Kojac gum; Passage=1 -0.5 -0.1 +0.3 -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.4 +0.4 -0.4 -0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.4 +0.2 -0.4 +0.2 N.D.
complex community Community=guar; Passage=4 +0.3 +0.3 -0.2 -0.9 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.4 +0.5 -0.5 +0.0 N.D.
complex community Community=arabino-guar; Passage=4 +0.1 +0.3 -0.7 -0.1 N.D.
complex community Community=Locust bean gum; Passage=4 -0.2 -0.7 +1.0 -0.2 N.D.
complex community Community=arabino-guar; Passage=4 +0.3 -0.3 +0.5 -0.6 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.4 -0.5 +0.0 N.D.
phage phage_bap4 +0.1 +0.4 -0.3 -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.1 -0.2 +0.6 N.D.
no phage control no phage control -0.3 +0.4 -0.0 +0.2 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.6 -0.4 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.5 +0.4 -0.1 -0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.4 +0.6 -0.2 +0.5 N.D.
complex community Community=arabino-guar; Passage=4 -0.6 +0.7 +0.3 +0.3 N.D.
complex community Community=guar; Passage=4 +0.8 +0.2 +0.1 -0.1 N.D.
complex community Community=Kojac gum; Passage=4 +1.4 -0.1 +0.3 -0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.6 +0.6 -0.1 +0.2 N.D.
remove
GFF7011
plot		 remove
GFF7012
plot		 remove
GFF7013		 remove
GFF7014
plot		 remove
GFF7015
plot