Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF7010 and GFF7011 are separated by 1276 nucleotidesGFF7011 and GFF7012 overlap by 8 nucleotidesGFF7012 and GFF7013 are separated by 53 nucleotidesGFF7013 and GFF7014 are separated by 177 nucleotides GFF7010 - no description, at 25,035 to 25,337 GFF7010 GFF7011 - Taurine ABC transporter, permease protein TauC, at 26,614 to 27,510 GFF7011 GFF7012 - Taurine ABC transporter, ATP-binding protein TauB, at 27,503 to 28,291 GFF7012 GFF7013 - Taurine ABC transporter, substrate-binding protein TauA, at 28,345 to 29,355 GFF7013 GFF7014 - Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1), at 29,533 to 31,068 GFF7014
Group Condition GFF7010 GFF7011 GFF7012 GFF7013 GFF7014
complex community Community=guar; Passage=4 -4.9 +0.3 +0.3 -0.2 -0.9
complex community Community=Locust bean gum; Passage=4 -3.4 +0.2 -0.9 -0.3 +0.1
complex community Community=Locust bean gum; Passage=4 -3.4 -0.2 -0.7 +1.0 -0.2
complex community Community=guar; Passage=4 -1.5 +0.2 -0.8 +0.4 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.9 -0.5 -0.2 +0.0 -0.4
complex community Community=arabino-guar; Passage=4 -1.7 +0.3 -0.3 +0.5 -0.6
complex community Community=Locust bean gum; Passage=4 +0.3 +0.8 -1.8 -0.5 -0.3
phage phage_bap4 +0.1 -0.9 +0.2 -0.4 -0.3
complex community Community=arabino-guar; Passage=4 +1.7 -1.6 -0.3 -0.1 -0.6
complex community Community=guar; Passage=4 -0.7 -0.3 +0.1 -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.5 -0.4 +0.5 -0.5 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.9 -0.1 +0.5 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 -0.5 +0.3 -0.4 -0.1
complex community Community=Locust bean gum; Passage=4 +0.9 -0.7 -0.6 +0.2 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 -0.4 +0.4 -0.4 -0.0
complex community Community=arabino-guar; Passage=4 -0.0 +0.1 +0.3 -0.7 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 -1.0 +0.1 +0.1 +0.3
complex community Community=Kojac gum; Passage=1 +0.3 -0.5 -0.1 +0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 -0.4 +0.2 -0.4 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.5 +0.1 +0.6 -0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.2 +0.1 -0.2 +0.6
no phage control no phage control -0.3 -0.3 +0.4 -0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 +0.5 +0.4 -0.1 -0.2
complex community Community=Kojac gum; Passage=4 -0.9 +1.4 -0.1 +0.3 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.4 -0.1 -0.4 +0.3 +0.1
phage phage_bap4 +0.6 +0.1 +0.4 -0.3 -0.1
complex community Community=arabino-guar; Passage=4 +0.2 -0.6 +0.7 +0.3 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 -0.4 +0.6 -0.2 +0.5
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 +0.6 +0.6 -0.1 +0.2
complex community Community=guar; Passage=4 +0.2 +0.8 +0.2 +0.1 -0.1
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