Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF7008 and GFF7009 are separated by 401 nucleotidesGFF7009 and GFF7010 are separated by 104 nucleotidesGFF7010 and GFF7011 are separated by 1276 nucleotidesGFF7011 and GFF7012 overlap by 8 nucleotides GFF7008 - no description, at 23,984 to 24,133 GFF7008 GFF7009 - hypothetical protein, at 24,535 to 24,930 GFF7009 GFF7010 - no description, at 25,035 to 25,337 GFF7010 GFF7011 - Taurine ABC transporter, permease protein TauC, at 26,614 to 27,510 GFF7011 GFF7012 - Taurine ABC transporter, ATP-binding protein TauB, at 27,503 to 28,291 GFF7012
Group Condition GFF7008 GFF7009 GFF7010 GFF7011 GFF7012
complex community Community=Locust bean gum; Passage=4 N.D. -0.4 -3.4 -0.2 -0.7
complex community Community=Locust bean gum; Passage=4 N.D. +0.0 -3.4 +0.2 -0.9
complex community Community=guar; Passage=4 N.D. +0.3 -4.9 +0.3 +0.3
complex community Community=guar; Passage=4 N.D. +0.0 -1.5 +0.2 -0.8
complex community Community=arabino-guar; Passage=4 N.D. -0.4 -1.7 +0.3 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.0 -0.9 -0.5 -0.2
complex community Community=Locust bean gum; Passage=4 N.D. -0.3 +0.3 +0.8 -1.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.4 -0.9 -0.1 +0.5
complex community Community=guar; Passage=4 N.D. +0.1 -0.7 -0.3 +0.1
phage phage_bap4 N.D. -0.1 +0.1 -0.9 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.6 +0.0 -0.5 +0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. +0.0 +0.1 -1.0 +0.1
complex community Community=arabino-guar; Passage=4 N.D. -0.2 +1.7 -1.6 -0.3
no phage control no phage control N.D. -0.1 -0.3 -0.3 +0.4
complex community Community=Locust bean gum; Passage=4 N.D. +0.0 +0.9 -0.7 -0.6
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -0.0 -0.5 -0.4 +0.5
complex community Community=arabino-guar; Passage=4 N.D. -0.6 +0.2 -0.6 +0.7
complex community Community=Kojac gum; Passage=1 N.D. +0.1 +0.3 -0.5 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.0 -0.1 -0.4 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.1 +0.3 -0.4 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.1 -0.5 +0.1 +0.6
phage phage_bap4 N.D. -0.1 +0.4 -0.3 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.1 +0.3 -0.4 +0.6
no phage control no phage control N.D. -0.2 +0.4 +0.3 +0.0
complex community Community=Kojac gum; Passage=4 N.D. +0.2 -0.9 +1.4 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.0 -0.3 +0.5 +0.4
phage phage_bap4 N.D. -0.1 +0.5 -0.2 +0.5
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.0 -0.3 +0.6 +0.6
phage phage_bap4 N.D. -0.1 +0.6 +0.1 +0.4
complex community Community=guar; Passage=4 N.D. -0.2 +0.2 +0.8 +0.2
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