Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF699 and GFF700 are separated by 89 nucleotidesGFF700 and GFF701 overlap by 4 nucleotidesGFF701 and GFF702 are separated by 56 nucleotidesGFF702 and GFF703 are separated by 152 nucleotides GFF699 - Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone, at 378,215 to 378,811 GFF699 GFF700 - Two-component system response regulator QseB, at 378,901 to 379,560 GFF700 GFF701 - Sensory histidine kinase QseC, at 379,557 to 380,894 GFF701 GFF702 - Outer membrane stress sensor protease DegS, at 380,951 to 382,429 GFF702 GFF703 - TRAP-type C4-dicarboxylate transport system, small permease component, at 382,582 to 383,130 GFF703
Group Condition GFF699 GFF700 GFF701 GFF702 GFF703
carbon source Ying_all64 rep C; time point 2 -0.4 +0.1 -1.9 -0.2 -0.5
carbon source Ying_all64 rep C; time point 3 +0.1 +0.2 -1.9 +0.2 -0.1
carbon source Ying_Others16 rep A; time point 1 -0.6 -0.2 -0.3 -0.3 +0.0
carbon source Ying_Others16 rep C; time point 1 -0.6 -0.2 -0.3 -0.1 +0.0
carbon source Ying_Others16 rep C; time point 2 -0.6 -0.1 -0.2 -0.3 +0.0
carbon source Ying_Others16 rep A; time point 3 -0.1 +0.1 -1.4 +0.2 +0.1
carbon source Ying_Others16 rep A; time point 2 -0.5 -0.1 -0.5 +0.1 -0.1
carbon source Ying_AminoAcid20 rep A; time point 2 -0.6 -0.1 +0.1 -0.2 +0.0
carbon source Ying_OrganicAcid7 rep A; time point 2 -0.2 -0.1 -0.2 -0.4 +0.2
carbon source Ying_sugar7 rep C; time point 2 +0.2 +0.0 -0.9 -0.1 -0.0
carbon source Ying_AminoAcid20 rep B; time point 1 -0.2 -0.1 +0.1 -0.3 -0.2
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.0 +0.1 -0.9 +0.1 +0.0
carbon source Ying_Others16 rep C; time point 3 -0.4 +0.1 -0.4 +0.1 -0.0
carbon source Ying_sugar7 rep A; time point 3 +0.4 -0.1 -0.8 +0.0 -0.0
carbon source Ying_sugar7 rep A; time point 2 +0.2 -0.2 -0.7 +0.0 +0.0
carbon source Ying_sugar7 rep C; time point 1 +0.3 -0.1 -0.5 -0.2 +0.0
carbon source Ying_AminoAcid20 rep A; time point 1 -0.6 -0.1 -0.0 +0.2 +0.1
carbon source Ying_sugar7 rep A; time point 1 +0.3 -0.1 -0.3 -0.3 +0.0
carbon source Ying_Others16 rep B; time point 3 +0.7 -0.0 -0.6 -0.4 -0.0
carbon source Ying_sugar7 rep B; time point 2 +0.4 -0.2 -0.5 -0.2 +0.3
carbon source Ying_OrganicAcid7 rep B; time point 3 +0.1 +0.1 -0.5 +0.2 -0.2
carbon source Ying_sugar7 rep B; time point 3 +0.1 -0.0 -0.6 +0.3 -0.0
carbon source Ying_sugar7 rep B; time point 1 +0.4 +0.1 -0.4 -0.2 -0.1
carbon source Ying_sugar7 rep C; time point 3 +0.5 -0.1 -0.5 +0.0 -0.1
carbon source Ying_Nucleobase14 rep C; time point 2 +0.8 -0.1 -0.2 -0.4 +0.1
carbon source Ying_Nucleobase14 rep B; time point 1 +0.8 -0.0 -0.1 -0.5 +0.1
carbon source Ying_Nucleobase14 rep A; time point 1 +0.4 -0.2 -0.1 -0.0 +0.2
carbon source Ying_Nucleobase14 rep A; time point 2 +1.1 -0.1 -0.6 +0.1 +0.0
carbon source Ying_Nucleobase14 rep B; time point 2 +1.1 -0.1 -0.4 -0.1 +0.2
carbon source Ying_Nucleobase14 rep C; time point 1 +0.7 +0.0 -0.1 +0.3 +0.1
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