Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF7007 and GFF7008 are separated by 114 nucleotidesGFF7008 and GFF7009 are separated by 401 nucleotidesGFF7009 and GFF7010 are separated by 104 nucleotidesGFF7010 and GFF7011 are separated by 1276 nucleotides GFF7007 - Flagellar biosynthesis protein FliQ, at 23,603 to 23,869 GFF7007 GFF7008 - no description, at 23,984 to 24,133 GFF7008 GFF7009 - hypothetical protein, at 24,535 to 24,930 GFF7009 GFF7010 - no description, at 25,035 to 25,337 GFF7010 GFF7011 - Taurine ABC transporter, permease protein TauC, at 26,614 to 27,510 GFF7011
Group Condition GFF7007 GFF7008 GFF7009 GFF7010 GFF7011
complex community Community=guar; Passage=4 N.D. N.D. +0.3 -4.9 +0.3
complex community Community=Locust bean gum; Passage=4 N.D. N.D. -0.4 -3.4 -0.2
complex community Community=Locust bean gum; Passage=4 N.D. N.D. +0.0 -3.4 +0.2
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.4 -1.7 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. -0.4 -0.9 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. -0.0 -0.9 -0.5
complex community Community=guar; Passage=4 N.D. N.D. +0.0 -1.5 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. -0.6 +0.0 -0.5
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.6 +0.2 -0.6
phage phage_bap4 N.D. N.D. -0.1 +0.1 -0.9
complex community Community=guar; Passage=4 N.D. N.D. +0.1 -0.7 -0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. N.D. -0.0 -0.5 -0.4
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. N.D. +0.0 +0.1 -1.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. -0.3 -0.4 -0.2
no phage control no phage control N.D. N.D. -0.1 -0.3 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. -0.2 -0.5 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. N.D. -0.1 -0.5 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. -0.1 +0.3 -0.4
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.2 +1.7 -1.6
complex community Community=Kojac gum; Passage=1 N.D. N.D. +0.1 +0.3 -0.5
phage phage_bap4 N.D. N.D. -0.1 +0.4 -0.3
phage phage_bap4 N.D. N.D. -0.1 +0.5 -0.2
complex community Community=Locust bean gum; Passage=4 N.D. N.D. +0.0 +0.9 -0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. +0.0 -0.3 +0.5
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. N.D. -0.0 -0.3 +0.6
phage phage_bap4 N.D. N.D. -0.1 +0.6 +0.1
no phage control no phage control N.D. N.D. -0.2 +0.4 +0.3
complex community Community=Kojac gum; Passage=4 N.D. N.D. +0.2 -0.9 +1.4
complex community Community=guar; Passage=4 N.D. N.D. -0.2 +0.2 +0.8
complex community Community=Locust bean gum; Passage=4 N.D. N.D. -0.3 +0.3 +0.8
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