Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_00025	PS417_00030	PS417_00035	PS417_00040	PS417_00045
solid stress	Fraxetin 2 mM; solid stress	+0.1	-0.9	-0.3	-0.0	-6.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	+0.1	+0.6	-0.6	-6.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	-0.4	+0.1	+0.2	-6.4
solid stress	Fraxetin 2 mM; solid stress	+0.0	-0.2	+0.1	+0.2	-6.5
solid stress	Fraxetin 3 mM; solid stress	+0.2	-0.1	+0.0	+0.2	-6.6
solid stress	Fraxetin 3 mM; solid stress	-0.0	-0.4	-0.0	-0.0	-4.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.2	+0.4	+0.3	-0.1	-5.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.0	+0.7	-0.4	+0.2	-5.1
stress	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 2	+0.0	+0.1	-0.2	-0.2	-4.2
solid stress	Fraxetin 2 mM; solid stress	+0.1	+0.1	-0.1	+0.1	-4.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	+0.1	+0.4	+0.1	-4.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	-0.5	-0.5	-0.5	-2.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.2	-0.4	+0.0	+0.0	-3.6
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.0	-0.0	+0.4	+0.2	-4.3
solid stress	Fraxetin 3 mM; solid stress	+0.0	-0.1	+0.1	+0.1	-3.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3	-0.6	+0.4	+0.1	-3.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.0	+0.8	-0.5	-0.1	-3.4
solid stress	Fraxetin 2 mM; solid stress	+0.1	+0.3	-0.1	+0.1	-3.4
solid stress	Fraxetin 3 mM; solid stress	+0.2	-0.5	+0.3	+0.0	-2.9
soil	soil sample 3; outgrowth in LB	-0.0	+0.2	+0.4	-0.2	-3.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.3	+0.5	-0.1	+0.4	-3.0
solid stress	Fraxetin 2 mM; solid stress	+0.2	-0.1	+0.2	+0.3	-3.1
liquid stress	Fraxetin 3 mM; liquid stress	+1.0	+0.4	-0.3	+0.9	-2.1
liquid stress	Fraxetin 3 mM; liquid stress	+1.4	-0.0	-0.3	+1.3	-2.1
liquid stress	Fraxetin 3 mM; liquid stress	+1.6	+0.4	-0.2	+1.3	-2.1
liquid stress	80% Methanol 3 mM; liquid stress	+1.2	+0.7	-0.2	+1.2	-1.3
liquid stress	Fraxetin 3 mM; liquid stress	+1.4	+0.5	-0.0	+1.2	-0.9
liquid stress	80% Methanol 3 mM; liquid stress	+1.3	+0.7	-0.2	+1.2	-0.8
liquid stress	80% Methanol 3 mM; liquid stress	+1.6	+0.5	-0.3	+1.6	-1.2
stress	Neomycin 0.04 mg/ml	-0.0	-0.0	-0.2	+0.2	+4.3