Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6965 and GFF6966 overlap by 1 nucleotidesGFF6966 and GFF6967 are separated by 103 nucleotidesGFF6967 and GFF6968 are separated by 847 nucleotidesGFF6968 and GFF6969 are separated by 277 nucleotides GFF6965 - Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion, at 38,488 to 38,625 GFF6965 GFF6966 - Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4), at 38,625 to 40,955 GFF6966 GFF6967 - Universal stress protein family, at 41,059 to 41,502 GFF6967 GFF6968 - no description, at 42,350 to 43,948 GFF6968 GFF6969 - hypothetical protein, at 44,226 to 44,558 GFF6969
Group Condition GFF6965 GFF6966 GFF6967 GFF6968 GFF6969
complex community Community=guar; Passage=4 N.D. -2.1 N.D. +0.1 -0.6
complex community Community=Locust bean gum; Passage=4 N.D. -0.1 N.D. -0.7 -1.0
complex community Community=Locust bean gum; Passage=4 N.D. +0.0 N.D. +0.1 -1.7
complex community Community=Locust bean gum; Passage=1 N.D. -1.0 N.D. -0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus N.D. -1.0 N.D. -0.1 +0.1
no phage control no phage control N.D. -0.7 N.D. -0.1 -0.1
phage phage_bap4 N.D. -0.4 N.D. -0.1 -0.3
complex community Community=guar; Passage=4 N.D. +0.3 N.D. -0.1 -0.7
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.6 N.D. +0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.6 N.D. +0.0 +0.1
phage phage_bap4 N.D. -0.5 N.D. -0.0 +0.2
complex community Community=arabino-guar; Passage=4 N.D. +0.6 N.D. +0.1 -0.9
complex community Community=arabino-guar; Passage=4 N.D. -0.5 N.D. -0.2 +0.5
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.4 N.D. -0.0 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.4 N.D. -0.1 +0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.4 N.D. -0.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.8 N.D. +0.1 +0.6
complex community Community=Kojac gum; Passage=1 N.D. -0.5 N.D. -0.1 +0.6
complex community Community=guar; Passage=4 N.D. -0.2 N.D. -0.1 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.2 N.D. -0.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.4 N.D. -0.0 +0.6
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -0.1 N.D. +0.0 +0.6
complex community Community=guar; Passage=4 N.D. -0.7 N.D. -0.2 +1.5
complex community Community=Locust bean gum; Passage=4 N.D. -0.2 N.D. +0.2 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. +0.3 N.D. -0.0 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.0 N.D. -0.0 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. +0.4 N.D. -0.0 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.3 N.D. +0.1 +0.6
complex community Community=Locust bean gum; Passage=4 N.D. +0.2 N.D. +0.1 +1.2
complex community Community=arabino-guar; Passage=4 N.D. +1.4 N.D. +0.0 +0.1
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