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Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF694 and GFF695 overlap by 4 nucleotides
GFF695 and GFF696 are separated by 164 nucleotides
GFF696 and GFF697 are separated by 3 nucleotides
GFF697 and GFF698 are separated by 121 nucleotides
GFF694 - 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-), at 749,345 to 750,208
GFF694
GFF695 - Cytochrome B561, at 750,205 to 750,777
GFF695
GFF696 - Glycosyl transferase, group 2 family, at 750,942 to 752,372
GFF696
GFF697 - FIG074102: hypothetical protein, at 752,376 to 753,200
GFF697
GFF698 - Transcriptional regulator, LysR family, at 753,322 to 754,206
GFF698
Group
Condition
GFF694
GFF695
GFF696
GFF697
GFF698
complex community
Community=arabino-guar; Passage=4
-3.6
-0.2
+0.1
+0.3
-0.2
complex community
Community=Locust bean gum; Passage=4
-2.4
-0.0
-0.0
-0.4
-0.2
complex community
Community=guar; Passage=4
-2.8
-0.4
+0.1
-0.0
+0.0
complex community
Community=Locust bean gum; Passage=4
-2.2
+0.1
-0.1
-0.1
-0.1
complex community
Community=Locust bean gum; Passage=4
-0.8
-0.4
-0.1
-0.0
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-1.0
-0.1
-0.0
-0.0
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-1.0
-0.1
-0.0
+0.0
-0.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.7
-0.1
-0.1
-0.1
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.4
-0.1
-0.1
-0.3
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.3
-0.2
-0.0
-0.2
-0.2
no phage control
no phage control
-0.8
-0.0
-0.1
+0.0
-0.1
complex community
Community=Kojac gum; Passage=1
-0.7
-0.0
+0.0
-0.1
+0.0
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
-0.5
-0.1
-0.0
+0.1
-0.2
phage
phage_bap4
-0.6
-0.1
+0.0
+0.1
+0.0
complex community
Community=arabino-guar; Passage=4
-1.3
+0.0
+0.3
+0.4
-0.1
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
-0.3
-0.2
-0.0
+0.1
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.4
-0.4
+0.0
-0.2
-0.4
phage
phage_bap4
-0.6
-0.0
+0.1
+0.0
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.2
-0.2
-0.0
-0.2
-0.3
vitamin
M9 with Supernatant from Cyptococcus
-0.3
+0.1
-0.1
+0.2
-0.2
phage
phage_bap4
-0.5
+0.1
+0.1
+0.0
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.3
-0.1
-0.1
-0.1
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.4
-0.2
-0.0
-0.0
-0.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.3
-0.1
+0.1
+0.2
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.5
-0.1
-0.0
+0.0
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.6
-0.1
-0.0
-0.1
-0.1
complex community
Community=Kojac gum; Passage=4
+0.4
-0.0
-0.3
+0.1
+0.2
phage
phage_bap4
-0.2
+0.2
+0.2
+0.2
+0.1
phage
phage_bap4
+0.4
+0.0
+0.1
+0.3
-0.1
complex community
Community=arabino-guar; Passage=4
+0.7
+0.3
+0.2
-0.0
+0.2
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