Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF694 and GFF695 overlap by 4 nucleotidesGFF695 and GFF696 are separated by 164 nucleotidesGFF696 and GFF697 are separated by 3 nucleotidesGFF697 and GFF698 are separated by 121 nucleotides GFF694 - 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-), at 749,345 to 750,208 GFF694 GFF695 - Cytochrome B561, at 750,205 to 750,777 GFF695 GFF696 - Glycosyl transferase, group 2 family, at 750,942 to 752,372 GFF696 GFF697 - FIG074102: hypothetical protein, at 752,376 to 753,200 GFF697 GFF698 - Transcriptional regulator, LysR family, at 753,322 to 754,206 GFF698
Group Condition GFF694 GFF695 GFF696 GFF697 GFF698
complex community Community=arabino-guar; Passage=4 -3.6 -0.2 +0.1 +0.3 -0.2
complex community Community=Locust bean gum; Passage=4 -2.4 -0.0 -0.0 -0.4 -0.2
complex community Community=guar; Passage=4 -2.8 -0.4 +0.1 -0.0 +0.0
complex community Community=Locust bean gum; Passage=4 -2.2 +0.1 -0.1 -0.1 -0.1
complex community Community=Locust bean gum; Passage=4 -0.8 -0.4 -0.1 -0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -1.0 -0.1 -0.0 -0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -1.0 -0.1 -0.0 +0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.7 -0.1 -0.1 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.4 -0.1 -0.1 -0.3 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 -0.2 -0.0 -0.2 -0.2
no phage control no phage control -0.8 -0.0 -0.1 +0.0 -0.1
complex community Community=Kojac gum; Passage=1 -0.7 -0.0 +0.0 -0.1 +0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.5 -0.1 -0.0 +0.1 -0.2
phage phage_bap4 -0.6 -0.1 +0.0 +0.1 +0.0
complex community Community=arabino-guar; Passage=4 -1.3 +0.0 +0.3 +0.4 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.3 -0.2 -0.0 +0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.4 -0.4 +0.0 -0.2 -0.4
phage phage_bap4 -0.6 -0.0 +0.1 +0.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -0.2 -0.0 -0.2 -0.3
vitamin M9 with Supernatant from Cyptococcus -0.3 +0.1 -0.1 +0.2 -0.2
phage phage_bap4 -0.5 +0.1 +0.1 +0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 -0.1 -0.1 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.4 -0.2 -0.0 -0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 -0.1 +0.1 +0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.5 -0.1 -0.0 +0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.6 -0.1 -0.0 -0.1 -0.1
complex community Community=Kojac gum; Passage=4 +0.4 -0.0 -0.3 +0.1 +0.2
phage phage_bap4 -0.2 +0.2 +0.2 +0.2 +0.1
phage phage_bap4 +0.4 +0.0 +0.1 +0.3 -0.1
complex community Community=arabino-guar; Passage=4 +0.7 +0.3 +0.2 -0.0 +0.2
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