Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF6950 and GFF6951 are separated by 99 nucleotidesGFF6951 and GFF6952 are separated by 21 nucleotidesGFF6952 and GFF6953 are separated by 7 nucleotidesGFF6953 and GFF6954 are separated by 183 nucleotides GFF6950 - Acetoacetyl-CoA reductase (EC 1.1.1.36), at 26,321 to 27,040 GFF6950 GFF6951 - Alcohol dehydrogenase (EC 1.1.1.1), at 27,140 to 28,129 GFF6951 GFF6952 - Metallo-beta-lactamase family protein, RNA-specific, at 28,151 to 29,503 GFF6952 GFF6953 - Universal stress protein UspA and related nucleotide-binding proteins, at 29,511 to 30,335 GFF6953 GFF6954 - no description, at 30,519 to 30,722 GFF6954
Group Condition GFF6950 GFF6951 GFF6952 GFF6953 GFF6954
complex community Community=arabino-guar; Passage=4 -1.6 -0.1 -0.4 -0.4 N.D.
complex community Community=guar; Passage=4 -1.4 -0.4 -0.1 +0.1 N.D.
complex community Community=guar; Passage=4 -0.7 -1.2 -0.1 +0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.7 +0.1 -0.3 -0.2 N.D.
vitamin M9 with Supernatant from Cyptococcus -0.7 -0.2 -0.1 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.8 +0.2 -0.1 -0.1 N.D.
complex community Community=arabino-guar; Passage=4 -0.2 +0.1 -0.1 -0.6 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.5 +0.3 -0.4 -0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 +0.1 -0.2 -0.2 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.4 -0.1 -0.3 N.D.
no phage control no phage control -0.6 -0.1 -0.1 +0.1 N.D.
complex community Community=arabino-guar; Passage=4 +0.3 -0.6 -0.6 +0.3 N.D.
complex community Community=Locust bean gum; Passage=4 -0.6 -0.3 -0.1 +0.4 N.D.
phage phage_bap4 -0.2 -0.4 +0.1 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.2 -0.2 +0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.6 +0.2 -0.1 +0.2 N.D.
complex community Community=arabino-guar; Passage=4 -0.6 -0.2 +0.0 +0.5 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 -0.5 -0.2 +0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.3 -0.2 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.3 -0.2 -0.2 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.5 -0.4 +0.0 +0.0 N.D.
complex community Community=Locust bean gum; Passage=4 +1.3 -0.6 -0.4 -0.2 N.D.
complex community Community=Locust bean gum; Passage=1 +0.5 -0.2 -0.0 -0.2 N.D.
phage phage_bap4 -0.1 -0.1 -0.1 +0.5 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.5 -0.2 +0.0 -0.1 N.D.
complex community Community=Kojac gum; Passage=4 +0.8 +0.0 -0.2 -0.3 N.D.
complex community Community=guar; Passage=4 +0.7 -0.5 -0.2 +0.3 N.D.
complex community Community=Locust bean gum; Passage=4 +0.5 -0.1 +0.3 -0.1 N.D.
complex community Community=guar; Passage=4 +1.0 -0.0 -0.3 +0.0 N.D.
complex community Community=Locust bean gum; Passage=4 +1.2 -0.5 -0.0 +0.6 N.D.
remove
GFF6950
plot		 remove
GFF6951
plot		 remove
GFF6952		 remove
GFF6953
plot		 remove
GFF6954
plot