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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF6947 and GFF6948 are separated by 235 nucleotides
GFF6948 and GFF6949 are separated by 136 nucleotides
GFF6949 and GFF6950 are separated by 1 nucleotides
GFF6950 and GFF6951 are separated by 99 nucleotides
GFF6947 - transcriptional regulator, Crp/Fnr family, at 24,023 to 24,790
GFF6947
GFF6948 - Ornithine carbamoyltransferase (EC 2.1.3.3), at 25,026 to 25,529
GFF6948
GFF6949 - no description, at 25,666 to 26,319
GFF6949
GFF6950 - Acetoacetyl-CoA reductase (EC 1.1.1.36), at 26,321 to 27,040
GFF6950
GFF6951 - Alcohol dehydrogenase (EC 1.1.1.1), at 27,140 to 28,129
GFF6951
Group
Condition
GFF6947
GFF6948
GFF6949
GFF6950
GFF6951
complex community
Community=arabino-guar; Passage=4
-1.5
N.D.
-3.8
-0.6
-0.2
complex community
Community=guar; Passage=4
-0.6
N.D.
-0.6
-1.4
-0.4
complex community
Community=guar; Passage=4
+0.3
N.D.
-0.8
-0.7
-1.2
complex community
Community=arabino-guar; Passage=4
-0.3
N.D.
+0.0
-1.6
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.1
N.D.
-1.6
-0.1
-0.0
complex community
Community=Kojac gum; Passage=4
-0.3
N.D.
-2.1
+0.8
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.0
N.D.
-1.0
-0.5
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.1
N.D.
-0.3
-0.7
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.2
N.D.
-0.9
-0.0
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.2
N.D.
-0.2
-0.6
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.2
N.D.
-0.6
+0.3
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.2
N.D.
-0.4
-0.3
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.4
N.D.
-0.3
-0.2
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
N.D.
-0.8
+0.5
-0.4
vitamin
M9 with Supernatant from Cyptococcus
+0.0
N.D.
+0.4
-0.7
-0.2
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.3
N.D.
+0.1
+0.3
-0.5
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
-0.3
N.D.
+0.6
-0.2
-0.2
complex community
Community=Locust bean gum; Passage=4
+0.7
N.D.
+0.1
-0.6
-0.3
phage
phage_bap4
+0.7
N.D.
-0.5
-0.1
-0.1
phage
phage_bap4
+1.2
N.D.
-1.1
-0.3
+0.2
complex community
Community=Locust bean gum; Passage=4
-1.0
N.D.
+0.2
+1.2
-0.5
complex community
Community=Locust bean gum; Passage=4
+0.3
N.D.
-0.5
+0.5
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.4
N.D.
+0.5
-0.8
+0.2
phage
phage_bap4
+0.1
N.D.
+0.6
-0.5
+0.0
complex community
Community=Locust bean gum; Passage=1
+0.4
N.D.
+0.3
+0.5
-0.2
complex community
Community=arabino-guar; Passage=4
-0.1
N.D.
+1.4
-0.2
+0.1
complex community
Community=arabino-guar; Passage=4
+0.0
N.D.
+1.7
+0.3
-0.6
complex community
Community=Locust bean gum; Passage=4
+0.8
N.D.
+0.3
+1.3
-0.6
complex community
Community=guar; Passage=4
+0.5
N.D.
+0.4
+1.0
-0.0
complex community
Community=guar; Passage=4
+0.8
N.D.
+1.1
+0.7
-0.5
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