Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6945 and GFF6946 overlap by 8 nucleotidesGFF6946 and GFF6947 are separated by 21 nucleotidesGFF6947 and GFF6948 are separated by 235 nucleotidesGFF6948 and GFF6949 are separated by 136 nucleotides GFF6945 - Two-component transcriptional response regulator, OmpR family, at 21,163 to 21,891 GFF6945 GFF6946 - Sensory box histidine kinase/response regulator, at 21,884 to 24,001 GFF6946 GFF6947 - transcriptional regulator, Crp/Fnr family, at 24,023 to 24,790 GFF6947 GFF6948 - Ornithine carbamoyltransferase (EC 2.1.3.3), at 25,026 to 25,529 GFF6948 GFF6949 - no description, at 25,666 to 26,319 GFF6949
Group Condition GFF6945 GFF6946 GFF6947 GFF6948 GFF6949
complex community Community=arabino-guar; Passage=4 -0.2 +0.4 -1.5 N.D. -3.8
complex community Community=Kojac gum; Passage=4 -0.3 +0.4 -0.3 N.D. -2.1
complex community Community=guar; Passage=4 -0.9 +0.1 -0.6 N.D. -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 +0.1 -0.1 N.D. -1.6
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.1 +0.0 N.D. -1.0
phage phage_bap4 -0.3 -0.1 -0.4 N.D. +0.2
complex community Community=guar; Passage=4 -0.2 +0.1 +0.3 N.D. -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 +0.1 +0.2 N.D. -0.9
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.1 +0.1 N.D. -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.3 -0.2 N.D. -0.5
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 +0.2 -0.4 N.D. -0.3
complex community Community=Locust bean gum; Passage=4 -0.2 +0.7 -1.0 N.D. +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.3 +0.1 +0.1 N.D. -0.6
complex community Community=Locust bean gum; Passage=4 +0.0 +0.3 +0.3 N.D. -0.5
complex community Community=Locust bean gum; Passage=4 -0.2 -0.4 +0.7 N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.5 +0.3 +0.0 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 +0.4 +0.1 N.D. -0.4
complex community Community=arabino-guar; Passage=4 +0.4 +0.3 -0.3 N.D. +0.0
complex community Community=arabino-guar; Passage=4 -0.7 +0.0 -0.1 N.D. +1.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.4 -0.3 N.D. +0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.5 +0.3 -0.3 N.D. +0.6
complex community Community=guar; Passage=4 +0.1 +0.3 +0.5 N.D. +0.4
complex community Community=Locust bean gum; Passage=4 +0.6 -0.2 +0.8 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.5 +0.3 +0.4 N.D. +0.5
phage phage_bap4 +0.8 +0.7 +0.7 N.D. -0.5
phage phage_bap4 +0.4 +0.6 +0.1 N.D. +0.6
phage phage_bap4 +0.8 +0.7 +0.7 N.D. -0.2
complex community Community=arabino-guar; Passage=4 +0.2 +0.2 +0.0 N.D. +1.7
complex community Community=guar; Passage=4 +0.2 +0.0 +0.8 N.D. +1.1
phage phage_bap4 +1.4 +1.0 +1.2 N.D. -1.1
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