Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF6944 and GFF6945 are separated by 101 nucleotidesGFF6945 and GFF6946 overlap by 8 nucleotidesGFF6946 and GFF6947 are separated by 21 nucleotidesGFF6947 and GFF6948 are separated by 235 nucleotides GFF6944 - Xylulose-5-phosphate phosphoketolase (EC 4.1.2.9) @ Fructose-6-phosphate phosphoketolase (EC 4.1.2.22), at 18,689 to 21,061 GFF6944 GFF6945 - Two-component transcriptional response regulator, OmpR family, at 21,163 to 21,891 GFF6945 GFF6946 - Sensory box histidine kinase/response regulator, at 21,884 to 24,001 GFF6946 GFF6947 - transcriptional regulator, Crp/Fnr family, at 24,023 to 24,790 GFF6947 GFF6948 - Ornithine carbamoyltransferase (EC 2.1.3.3), at 25,026 to 25,529 GFF6948
Group Condition GFF6944 GFF6945 GFF6946 GFF6947 GFF6948
complex community Community=guar; Passage=4 -0.2 -0.9 +0.1 -0.6 N.D.
complex community Community=arabino-guar; Passage=4 -0.0 -0.2 +0.4 -1.5 N.D.
phage phage_bap4 -0.2 -0.3 -0.1 -0.4 N.D.
complex community Community=arabino-guar; Passage=4 -0.1 -0.7 +0.0 -0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.3 -0.0 -0.3 N.D.
complex community Community=Locust bean gum; Passage=4 -0.2 -0.2 +0.7 -1.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.5 +0.3 +0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.2 +0.2 -0.4 N.D.
complex community Community=Kojac gum; Passage=4 +0.2 -0.3 +0.4 -0.3 N.D.
complex community Community=Locust bean gum; Passage=4 -0.0 -0.2 -0.4 +0.7 N.D.
complex community Community=arabino-guar; Passage=4 -0.3 +0.4 +0.3 -0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 +0.4 +0.1 -0.2 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 +0.5 +0.3 -0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 +0.1 +0.4 -0.3 N.D.
complex community Community=guar; Passage=4 +0.2 -0.2 +0.1 +0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.3 +0.3 +0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.2 +0.4 +0.1 N.D.
complex community Community=arabino-guar; Passage=4 +0.4 +0.2 +0.2 +0.0 N.D.
no phage control no phage control +0.1 +0.1 +0.4 +0.2 N.D.
complex community Community=Locust bean gum; Passage=4 +0.3 +0.0 +0.3 +0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.1 +0.3 +0.4 N.D.
no phage control no phage control -0.0 +0.2 +0.6 +0.1 N.D.
phage phage_bap4 +0.0 +0.4 +0.6 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 +0.5 +0.3 +0.4 N.D.
complex community Community=guar; Passage=4 +0.0 +0.2 +0.0 +0.8 N.D.
complex community Community=guar; Passage=4 +0.5 +0.1 +0.3 +0.5 N.D.
complex community Community=Locust bean gum; Passage=4 +0.1 +0.6 -0.2 +0.8 N.D.
phage phage_bap4 -0.3 +0.8 +0.7 +0.7 N.D.
phage phage_bap4 -0.2 +0.8 +0.7 +0.7 N.D.
phage phage_bap4 -0.0 +1.4 +1.0 +1.2 N.D.
remove
GFF6944
plot		 remove
GFF6945
plot		 remove
GFF6946		 remove
GFF6947
plot		 remove
GFF6948
plot