Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6943 and GFF6944 are separated by 189 nucleotidesGFF6944 and GFF6945 are separated by 101 nucleotidesGFF6945 and GFF6946 overlap by 8 nucleotidesGFF6946 and GFF6947 are separated by 21 nucleotides GFF6943 - no description, at 18,110 to 18,499 GFF6943 GFF6944 - Xylulose-5-phosphate phosphoketolase (EC 4.1.2.9) @ Fructose-6-phosphate phosphoketolase (EC 4.1.2.22), at 18,689 to 21,061 GFF6944 GFF6945 - Two-component transcriptional response regulator, OmpR family, at 21,163 to 21,891 GFF6945 GFF6946 - Sensory box histidine kinase/response regulator, at 21,884 to 24,001 GFF6946 GFF6947 - transcriptional regulator, Crp/Fnr family, at 24,023 to 24,790 GFF6947
Group Condition GFF6943 GFF6944 GFF6945 GFF6946 GFF6947
complex community Community=guar; Passage=4 N.D. -0.2 -0.9 +0.1 -0.6
complex community Community=arabino-guar; Passage=4 N.D. -0.0 -0.2 +0.4 -1.5
phage phage_bap4 N.D. -0.2 -0.3 -0.1 -0.4
complex community Community=arabino-guar; Passage=4 N.D. -0.1 -0.7 +0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.2 -0.3 -0.0 -0.3
complex community Community=Locust bean gum; Passage=4 N.D. -0.2 -0.2 +0.7 -1.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.1 -0.5 +0.3 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.1 +0.2 +0.2 -0.4
complex community Community=Kojac gum; Passage=4 N.D. +0.2 -0.3 +0.4 -0.3
complex community Community=Locust bean gum; Passage=4 N.D. -0.0 -0.2 -0.4 +0.7
complex community Community=arabino-guar; Passage=4 N.D. -0.3 +0.4 +0.3 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.2 +0.4 +0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -0.2 +0.5 +0.3 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.2 +0.1 +0.4 -0.3
complex community Community=guar; Passage=4 N.D. +0.2 -0.2 +0.1 +0.3
vitamin M9 with Supernatant from Cyptococcus N.D. -0.1 +0.3 +0.3 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.1 +0.2 +0.4 +0.1
complex community Community=arabino-guar; Passage=4 N.D. +0.4 +0.2 +0.2 +0.0
no phage control no phage control N.D. +0.1 +0.1 +0.4 +0.2
complex community Community=Locust bean gum; Passage=4 N.D. +0.3 +0.0 +0.3 +0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.1 +0.1 +0.3 +0.4
no phage control no phage control N.D. -0.0 +0.2 +0.6 +0.1
phage phage_bap4 N.D. +0.0 +0.4 +0.6 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.0 +0.5 +0.3 +0.4
complex community Community=guar; Passage=4 N.D. +0.0 +0.2 +0.0 +0.8
complex community Community=guar; Passage=4 N.D. +0.5 +0.1 +0.3 +0.5
complex community Community=Locust bean gum; Passage=4 N.D. +0.1 +0.6 -0.2 +0.8
phage phage_bap4 N.D. -0.3 +0.8 +0.7 +0.7
phage phage_bap4 N.D. -0.2 +0.8 +0.7 +0.7
phage phage_bap4 N.D. -0.0 +1.4 +1.0 +1.2
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