Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6921 and GFF6922 are separated by 76 nucleotidesGFF6922 and GFF6923 are separated by 52 nucleotidesGFF6923 and GFF6924 overlap by 4 nucleotidesGFF6924 and GFF6925 are separated by 121 nucleotides GFF6921 - no description, at 114 to 539 GFF6921 GFF6922 - Deacetylases, including yeast histone deacetylase and acetoin utilization protein, at 616 to 1,542 GFF6922 GFF6923 - Acetate permease ActP (cation/acetate symporter), at 1,595 to 3,331 GFF6923 GFF6924 - protein of unknown function DUF485, at 3,328 to 3,645 GFF6924 GFF6925 - Acetyl-CoA synthetase (EC 6.2.1.1), at 3,767 to 5,743 GFF6925
Group Condition GFF6921 GFF6922 GFF6923 GFF6924 GFF6925
complex community Community=arabino-guar; Passage=4 -0.4 -0.7 -0.3 -0.6 -0.2
complex community Community=Locust bean gum; Passage=4 -0.7 +0.2 -0.8 +0.4 -0.4
complex community Community=guar; Passage=4 +0.5 -1.3 -0.1 -0.2 -0.1
complex community Community=guar; Passage=4 -0.6 -0.5 +0.1 -0.1 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 -0.4 -0.3 +0.1 +0.0
complex community Community=arabino-guar; Passage=4 +0.1 -0.4 -0.5 +0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.4 -0.1 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.1 -0.0 -0.4 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.6 +0.3 -0.1 -0.1 +0.0
complex community Community=Locust bean gum; Passage=4 -0.4 -0.0 +0.3 -0.0 -0.3
complex community Community=Kojac gum; Passage=1 -0.3 -0.0 -0.2 +0.2 -0.1
complex community Community=guar; Passage=4 +0.1 -0.4 -0.1 +0.4 -0.2
complex community Community=Locust bean gum; Passage=4 +0.2 -0.1 +0.1 -0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 +0.5 -0.1 +0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 -0.3 +0.2 +0.4 +0.2
no phage control no phage control +0.3 -0.1 +0.0 -0.2 +0.3
vitamin M9 with Supernatant from Cyptococcus +0.2 +0.4 -0.2 -0.1 +0.1
phage phage_bap4 +0.3 -0.2 +0.1 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.2 +0.0 +0.2 +0.2
complex community Community=arabino-guar; Passage=4 -0.1 +0.0 +0.6 +0.4 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.2 +0.2 -0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.3 +0.4 -0.1 -0.0 +0.1
no phage control no phage control +0.1 +0.1 -0.1 +0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 +0.3 +0.2 -0.0 +0.1
phage phage_bap4 +0.3 +0.2 +0.0 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 -0.1 +0.2 +0.4 +0.0
complex community Community=Locust bean gum; Passage=4 +0.5 +0.3 +0.4 -0.1 -0.1
complex community Community=Kojac gum; Passage=4 +0.0 -0.3 -0.3 +0.9 +0.6
phage phage_bap4 +0.3 +0.2 -0.1 +0.3 +0.2
no phage control no phage control +0.4 +0.2 +0.0 +0.2 +0.2
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