Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF690 and GFF691 are separated by 82 nucleotidesGFF691 and GFF692 are separated by 155 nucleotidesGFF692 and GFF693 overlap by 4 nucleotidesGFF693 and GFF694 are separated by 18 nucleotides GFF690 - Transcriptional regulator, IclR family, at 744,786 to 745,628 GFF690 GFF691 - hypothetical protein, at 745,711 to 747,162 GFF691 GFF692 - BUG/TctC family periplasmic protein, at 747,318 to 748,313 GFF692 GFF693 - BUG/TctC family periplasmic protein, at 748,310 to 749,326 GFF693 GFF694 - 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-), at 749,345 to 750,208 GFF694
Group Condition GFF690 GFF691 GFF692 GFF693 GFF694
complex community Community=arabino-guar; Passage=4 -0.7 -0.1 -0.3 +0.1 -3.6
complex community Community=Locust bean gum; Passage=4 -2.9 +0.2 +0.1 +0.3 -2.2
complex community Community=Locust bean gum; Passage=4 -0.6 -0.1 +0.1 +0.1 -2.4
complex community Community=guar; Passage=4 +0.1 -0.3 +0.1 +0.0 -2.8
complex community Community=arabino-guar; Passage=4 -0.4 -0.2 +0.1 -0.0 -1.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.7 -0.1 -0.1 -0.1 -0.7
complex community Community=Locust bean gum; Passage=4 -1.0 +0.1 -0.0 +0.1 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL -0.5 +0.0 -0.0 -0.0 -1.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.5 +0.0 -0.1 +0.1 -1.0
complex community Community=Kojac gum; Passage=1 -0.5 -0.2 -0.0 +0.0 -0.7
no phage control no phage control -0.5 -0.1 +0.0 +0.0 -0.8
no phage control no phage control -0.6 -0.0 -0.0 -0.0 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL -0.6 -0.1 -0.0 +0.0 -0.4
phage phage_bap4 -0.2 -0.2 -0.1 -0.0 -0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.6 -0.1 +0.1 -0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.1 +0.1 -0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.6 -0.2 -0.1 -0.1 +0.3
complex community Community=guar; Passage=4 -0.6 -0.0 -0.0 +0.1 -0.1
no phage control no phage control +0.1 -0.1 -0.0 +0.1 -0.6
vitamin M9 with Supernatant from Cyptococcus -0.8 +0.0 -0.1 -0.1 +0.3
phage phage_bap4 -0.2 +0.1 -0.1 +0.0 -0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.0 +0.2 -0.1 +0.0 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 -0.1 +0.1 -0.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 +0.1 -0.1 -0.1 +0.4
complex community Community=arabino-guar; Passage=4 -0.6 -0.2 +0.2 +0.0 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.0 +0.0 -0.1 +0.6
complex community Community=arabino-guar; Passage=4 +0.6 -0.3 -0.2 +0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.0 +0.2 -0.1 +0.5
phage phage_bap4 +0.4 +0.1 +0.2 +0.1 -0.2
complex community Community=Kojac gum; Passage=4 +0.1 +0.3 +0.2 -0.1 +0.4
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