Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6903 and GFF6904 are separated by 85 nucleotidesGFF6904 and GFF6905 are separated by 1 nucleotidesGFF6905 and GFF6906 are separated by 5 nucleotidesGFF6906 and GFF6907 are separated by 44 nucleotides GFF6903 - Transcriptional regulator, LysR family, at 38,008 to 38,916 GFF6903 GFF6904 - Zinc-type alcohol dehydrogenase-like protein, at 39,002 to 40,012 GFF6904 GFF6905 - Chloride channel protein, at 40,014 to 41,783 GFF6905 GFF6906 - Transcriptional regulator, MarR family, at 41,789 to 42,214 GFF6906 GFF6907 - Acetyltransferase, GNAT family, at 42,259 to 42,867 GFF6907
Group Condition GFF6903 GFF6904 GFF6905 GFF6906 GFF6907
complex community Community=Locust bean gum; Passage=4 -1.2 +0.3 +0.3 -0.3 N.D.
complex community Community=arabino-guar; Passage=4 +0.1 -0.6 -0.4 +0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.4 -0.0 +0.1 -0.4 N.D.
vitamin M9 with Supernatant from Cyptococcus -0.6 -0.0 -0.2 +0.2 N.D.
complex community Community=Locust bean gum; Passage=4 -0.6 -0.2 -0.1 +0.4 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 -0.0 -0.2 -0.6 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 +0.0 -0.2 -0.6 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.6 +0.1 +0.0 -0.0 N.D.
complex community Community=guar; Passage=4 -1.3 -0.3 +0.1 +1.1 N.D.
complex community Community=guar; Passage=4 +0.7 -0.2 +0.1 -1.1 N.D.
no phage control no phage control -0.3 -0.1 -0.2 +0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 +0.0 -0.1 -0.4 N.D.
no phage control no phage control -0.4 +0.0 -0.1 +0.4 N.D.
phage phage_bap4 -0.2 +0.0 -0.3 +0.5 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.5 -0.2 -0.2 +0.1 N.D.
complex community Community=Locust bean gum; Passage=4 +0.1 +0.3 +0.6 -0.8 N.D.
phage phage_bap4 +0.1 -0.3 +0.1 +0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.5 +0.3 -0.3 -0.2 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.7 -0.3 +0.1 +0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 +0.3 -0.1 +0.2 N.D.
complex community Community=Kojac gum; Passage=4 +0.5 +0.1 +0.3 -0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 +0.1 -0.1 +0.4 N.D.
no phage control no phage control +0.5 +0.1 -0.0 +0.3 N.D.
complex community Community=arabino-guar; Passage=4 +0.8 +0.2 -0.2 -0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.5 +0.1 -0.1 +0.3 N.D.
complex community Community=guar; Passage=4 +0.6 -0.2 +0.2 +0.3 N.D.
complex community Community=arabino-guar; Passage=4 -0.0 +0.7 -0.3 +0.6 N.D.
complex community Community=arabino-guar; Passage=4 +1.2 -0.0 +0.1 -0.2 N.D.
complex community Community=guar; Passage=4 +0.9 -0.2 +0.4 +0.7 N.D.
complex community Community=Locust bean gum; Passage=4 +0.4 +0.1 +0.5 +0.9 N.D.
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