Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF688 and GFF689 overlap by 4 nucleotidesGFF689 and GFF690 are separated by 56 nucleotidesGFF690 and GFF691 are separated by 82 nucleotidesGFF691 and GFF692 are separated by 155 nucleotides GFF688 - Uncharacterized conserved protein, at 742,985 to 743,437 GFF688 GFF689 - protein of unknown function DUF521, at 743,434 to 744,729 GFF689 GFF690 - Transcriptional regulator, IclR family, at 744,786 to 745,628 GFF690 GFF691 - hypothetical protein, at 745,711 to 747,162 GFF691 GFF692 - BUG/TctC family periplasmic protein, at 747,318 to 748,313 GFF692
Group Condition GFF688 GFF689 GFF690 GFF691 GFF692
complex community Community=Locust bean gum; Passage=4 N.D. -0.3 -2.9 +0.2 +0.1
complex community Community=arabino-guar; Passage=4 N.D. -0.2 -0.7 -0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.1 -0.7 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.0 -0.6 -0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus N.D. -0.1 -0.8 +0.0 -0.1
complex community Community=arabino-guar; Passage=4 N.D. -0.2 -0.6 -0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.0 -0.6 -0.1 -0.0
complex community Community=Locust bean gum; Passage=4 N.D. -0.2 -0.6 +0.1 -0.1
complex community Community=guar; Passage=4 N.D. -0.1 -0.6 -0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.1 -0.5 +0.0 -0.1
complex community Community=Locust bean gum; Passage=4 N.D. +0.2 -1.0 +0.1 -0.0
complex community Community=Locust bean gum; Passage=4 N.D. -0.0 -0.6 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus N.D. -0.3 -0.2 -0.1 -0.1
complex community Community=Kojac gum; Passage=1 N.D. +0.1 -0.5 -0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.1 -0.5 +0.0 -0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -0.0 -0.6 -0.1 +0.1
no phage control no phage control N.D. +0.1 -0.6 -0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. +0.0 -0.5 -0.1 +0.0
phage phage_bap4 N.D. +0.0 -0.2 -0.2 -0.1
no phage control no phage control N.D. +0.1 -0.5 -0.1 +0.0
complex community Community=arabino-guar; Passage=4 N.D. +0.2 -0.4 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.1 -0.3 -0.1 +0.1
phage phage_bap4 N.D. +0.2 -0.2 -0.1 +0.1
complex community Community=arabino-guar; Passage=4 N.D. -0.1 +0.6 -0.3 -0.2
complex community Community=guar; Passage=4 N.D. +0.1 +0.1 -0.3 +0.1
vitamin M9 with Supernatant from Cyptococcus N.D. -0.2 +0.2 +0.1 +0.1
complex community Community=guar; Passage=4 N.D. -0.0 +0.2 +0.2 -0.1
complex community Community=Kojac gum; Passage=4 N.D. -0.3 +0.1 +0.3 +0.2
phage phage_bap4 N.D. +0.3 -0.0 +0.1 +0.2
phage phage_bap4 N.D. +0.1 +0.4 +0.1 +0.2
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