Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6882 and GFF6883 are separated by 476 nucleotidesGFF6883 and GFF6884 are separated by 18 nucleotidesGFF6884 and GFF6885 are separated by 33 nucleotidesGFF6885 and GFF6886 are separated by 91 nucleotides GFF6882 - dTDP-glucose 4,6-dehydratase (EC 4.2.1.46), at 14,434 to 15,504 GFF6882 GFF6883 - D-amino acid dehydrogenase (EC 1.4.99.6), at 15,981 to 17,282 GFF6883 GFF6884 - FIG00932717: hypothetical protein, at 17,301 to 18,593 GFF6884 GFF6885 - hypothetical protein, at 18,627 to 19,379 GFF6885 GFF6886 - DNA-binding transcriptional regulator, MocR family / aminotransferase domain, at 19,471 to 20,916 GFF6886
Group Condition GFF6882 GFF6883 GFF6884 GFF6885 GFF6886
complex community Community=guar; Passage=4 N.D. +0.1 -0.3 -1.9 -0.2
complex community Community=Kojac gum; Passage=4 N.D. +0.0 -0.2 -1.3 +0.0
complex community Community=Locust bean gum; Passage=4 N.D. +0.2 -0.0 -1.5 -0.1
complex community Community=arabino-guar; Passage=4 N.D. -0.0 -0.1 -0.8 -0.2
complex community Community=guar; Passage=4 N.D. -0.1 -0.4 -0.5 -0.0
complex community Community=arabino-guar; Passage=4 N.D. -0.1 -0.2 -0.7 -0.1
complex community Community=guar; Passage=4 N.D. +0.2 -0.3 -0.8 -0.1
complex community Community=arabino-guar; Passage=4 N.D. +0.1 -0.1 -0.6 -0.2
complex community Community=Locust bean gum; Passage=4 N.D. +0.2 -0.0 -1.0 +0.0
complex community Community=Locust bean gum; Passage=4 N.D. +0.0 -0.4 -0.3 -0.1
complex community Community=arabino-guar; Passage=4 N.D. +0.1 -0.1 -0.4 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. +0.0 +0.1 -0.8 +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. +0.1 +0.0 -0.6 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.1 +0.2 -0.9 +0.1
phage phage_bap4 N.D. -0.0 -0.1 -0.4 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.0 +0.2 -0.6 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.0 +0.1 -0.6 +0.1
complex community Community=Locust bean gum; Passage=4 N.D. +0.3 -0.5 -0.0 -0.1
phage phage_bap4 N.D. -0.2 -0.2 +0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.0 +0.2 -0.6 +0.1
vitamin M9 with Supernatant from Cyptococcus N.D. +0.0 +0.1 -0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.1 +0.1 -0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.1 +0.2 -0.4 +0.0
complex community Community=guar; Passage=4 N.D. +0.3 +0.0 -0.2 +0.1
phage phage_bap4 N.D. +0.0 -0.2 +0.4 +0.1
no phage control no phage control N.D. +0.0 -0.1 +0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.1 +0.3 -0.1 +0.1
phage phage_bap4 N.D. +0.0 -0.1 +0.5 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.0 +0.2 +0.3 +0.1
complex community Community=Kojac gum; Passage=1 N.D. +0.0 +0.0 +0.5 +0.0
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