Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6881 and GFF6882 overlap by 4 nucleotidesGFF6882 and GFF6883 are separated by 476 nucleotidesGFF6883 and GFF6884 are separated by 18 nucleotidesGFF6884 and GFF6885 are separated by 33 nucleotides GFF6881 - dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133), at 13,547 to 14,437 GFF6881 GFF6882 - dTDP-glucose 4,6-dehydratase (EC 4.2.1.46), at 14,434 to 15,504 GFF6882 GFF6883 - D-amino acid dehydrogenase (EC 1.4.99.6), at 15,981 to 17,282 GFF6883 GFF6884 - FIG00932717: hypothetical protein, at 17,301 to 18,593 GFF6884 GFF6885 - hypothetical protein, at 18,627 to 19,379 GFF6885
Group Condition GFF6881 GFF6882 GFF6883 GFF6884 GFF6885
complex community Community=guar; Passage=4 N.D. N.D. +0.1 -0.3 -1.9
complex community Community=Kojac gum; Passage=4 N.D. N.D. +0.0 -0.2 -1.3
complex community Community=Locust bean gum; Passage=4 N.D. N.D. +0.2 -0.0 -1.5
complex community Community=guar; Passage=4 N.D. N.D. -0.1 -0.4 -0.5
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.1 -0.2 -0.7
complex community Community=guar; Passage=4 N.D. N.D. +0.2 -0.3 -0.8
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.0 -0.1 -0.8
complex community Community=Locust bean gum; Passage=4 N.D. N.D. +0.2 -0.0 -1.0
complex community Community=Locust bean gum; Passage=4 N.D. N.D. +0.0 -0.4 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. +0.0 +0.1 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. +0.1 +0.2 -0.9
complex community Community=arabino-guar; Passage=4 N.D. N.D. +0.1 -0.1 -0.6
phage phage_bap4 N.D. N.D. -0.0 -0.1 -0.4
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. N.D. +0.1 +0.0 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. +0.0 +0.1 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. +0.0 +0.2 -0.6
complex community Community=arabino-guar; Passage=4 N.D. N.D. +0.1 -0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. -0.0 +0.2 -0.6
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. +0.0 +0.1 -0.4
phage phage_bap4 N.D. N.D. -0.2 -0.2 +0.2
complex community Community=Locust bean gum; Passage=4 N.D. N.D. +0.3 -0.5 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. +0.1 +0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. +0.1 +0.2 -0.4
phage phage_bap4 N.D. N.D. +0.0 -0.2 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. +0.1 +0.3 -0.1
no phage control no phage control N.D. N.D. +0.0 -0.1 +0.4
phage phage_bap4 N.D. N.D. +0.0 -0.1 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. +0.0 +0.2 +0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. N.D. +0.2 +0.0 +0.3
complex community Community=Kojac gum; Passage=1 N.D. N.D. +0.0 +0.0 +0.5
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